Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03429 ATGATGAACGCAACTCGAGCAGAAGCTGAAAGATTACTCGGAATCTCAGAAAAACTCCTTCAAAACCGAGATCTAGTAGGTTCAAAAGAATTCGCAATCTTAGCTCAAGAAACCGAACCTCTTCTAGAAGGTTCCGATCAGATCTTAGCAATCATCGAAGTTCTCAGCGCCTCTGAAAAACGCATCAACAACAACCCTGATTGGTACTCAATTCTCCAAATTGATCGTAGATCCGACGACCTCGACCTTATCAAAAAACAGTACCGCCGTCTCGCTCTTCTCCTTCATCCTGACAAAAGCCGATTTCATTTCGCCGATCACGCTTTCAAGCTCGTCGCGGATGCATGGGCTGTTCTCTCCGATCCAATTAAGAAATCTCATTACGATAAAGATCTATCGTTTTTTGCTCGTGTTGATTTATCGGTTCCAAGTTGGGTTCAGCAAGATAAGTTACCGGTTCGAAGAACCGGTCCTGGTCCAGGTCCTGGAAATGGGTCTGGTGTTGGACCTGGACCGGGTACCGGTCCACGTAACAGTGCTGCTTCAGCTAGAGATGAAATAGCTGCTGATGTTCGTAGGAACGCGACGTTTTGGACGGCGTGTCCTTACTGTTACCGTTTGTATGAGTACCCTAAGATTTACGAGGGTTATTGTTTGAAATGTGCTCATTGTGAGAGATCTTTTCACGGTGTTAATGTTCCGTCTTTGCCGCCGTTAGTTCCGGGGCAAGAAGCTTATTATTGTTGTTGGGGTTTTTTCCCTATGGGGTTTGTACATGGTGGTTCTGTTGAGAAAGAGGCTGAGGTTGTGCCGGATGAACCTGCTCCGGTGCCAATAGCTGTTCAGCCGACTTCTTCGCTTCCGAATTGGATGCCGGCGCCTGTGCCTGTGGAGAATGGTGGGAATAATGTAATGCCGGTGGCACCCGTGTCAGCTACAGTTACTACGCCGGCGAGGGTGACAACAAGGTCGGGTGTTGTTACCGGTGGTGTTGCGAATGGTGTTGCTGGTTCGGGATCAGGTCCGAAGAAGCGGGGAAGGCCAAGGAAGTATTATTAA 1059 0.4816 MMNATRAEAERLLGISEKLLQNRDLVGSKEFAILAQETEPLLEGSDQILAIIEVLSASEKRINNNPDWYSILQIDRRSDDLDLIKKQYRRLALLLHPDKSRFHFADHAFKLVADAWAVLSDPIKKSHYDKDLSFFARVDLSVPSWVQQDKLPVRRTGPGPGPGNGSGVGPGPGTGPRNSAASARDEIAADVRRNATFWTACPYCYRLYEYPKIYEGYCLKCAHCERSFHGVNVPSLPPLVPGQEAYYCCWGFFPMGFVHGGSVEKEAEVVPDEPAPVPIAVQPTSSLPNWMPAPVPVENGGNNVMPVAPVSATVTTPARVTTRSGVVTGGVANGVAGSGSGPKKRGRPRKYY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03429 352 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Trre10g03429 352 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 309 - -
Trre10g03429 352 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Trre10g03429 352 MobiDBLite consensus disorder prediction 151 184 - -
Trre10g03429 352 Pfam DnaJ domain 67 129 IPR001623 -
Trre10g03429 352 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Trre10g03429 352 MobiDBLite consensus disorder prediction 331 352 - -
Trre10g03429 352 CDD DnaJ 67 121 IPR001623 -
Trre10g03429 352 SMART dnaj_3 66 124 IPR001623 -
Trre10g03429 352 Gene3D DnaJ domain 52 139 IPR036869 -
Trre10g03429 352 PRINTS DnaJ domain signature 104 124 IPR001623 -
Trre10g03429 352 PRINTS DnaJ domain signature 69 87 IPR001623 -
Trre10g03429 352 PRINTS DnaJ domain signature 88 103 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03429 Trre-Chr10 43991229 43992287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03429 3 349 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 46.610 3.55e-99 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03429 - - cam:101502408 548.51