Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03406 ATGCGAGAAAATTGTGGAACCTGGACACCCCAGGTGCAATTTAATTTGCAATCACCCAATTTGAATTCTTTCTGTGCTCCCTTTGATATGGGGAAGCAAAATGCTGCTGCATCTGCAGCGAAGAACCCGGTTGTCGATATGAATACGATTTCTAGGAATGAGGCTGTACCAACTTATGAATCCTCTGCATTACCTCATATGCAGTTAGGAAACTCTAATGAACCTCATGGTTGGTTTTATTGTTTGCCTCGATTTCGACAGGGTTTTACGTGTCCTCCAAACTTCACTTCTGAGGAAAAACTCCCTCAGCCTAGTCATTTGAAGGGTTTTAAGGAGGAAATTGCACCCAATGGGGAATTAGGATTTCCTCAGAAGCAGTTCCTCGTCATTGATCAAACGGGCGATCAAACAACTCTCATTTATAGTTCAAGATTTGGTAGCCCTGTTGAGTGCCTCGGTTCCTGGGATTCAAAATTGCATGGTTGTAACAATTTTAATGGGAATAATGAACCTTCTTTAAGAAGAGATGTAAATCATGTGGTTGGACTTGGATTTGGACCGACTTTTGATTATAAAGTTGATGAAAATGATAATCATCAAGGAACTGAGATTGAAAGCGAGATGCACGAAGACACGGAGGAGATCAATGCGTTGCTTTACTCAGACAGCGATGCCGATGGTTATTCTACCGAGGATGATGAAGTTACCAGTACTGGGCATTCACCTAGTACAATGACCACTCATGATAACCAGGAACCTTTCCGAATAGGAAGAATTTCCGAAGAAGTTGCTAGCTCCTCCCCCGGAAAAACAAAGAAACGTAAGCTATTCGATGTGGCTTATAATCATGATGATGTGCAGTTTACAGACACTGCAAATTCTCTAAAACAAAAGCGACGCTTCAACCACATGGGATATGATGACGACGATGCAGAATCAAGATGCTCTGGTAGCAATTACGGTCGAGGGTCATTTGAAATGGATTCCTTAGCAGGCACTAAAAAGATGAGAAAAGAAAAGATTCAAGATGTTCTAAGCATTTTGCAGTGCATAGTTCCTAATGGAAAGGACAAGGAACCAGTCCAGCTTCTTGATGAAGCCATACATTGCTTGAAATCTTTGAAACTCAAGGCTAAAGCTCTTGGACTCAAAGCCTTGTAA 1161 0.416 MRENCGTWTPQVQFNLQSPNLNSFCAPFDMGKQNAAASAAKNPVVDMNTISRNEAVPTYESSALPHMQLGNSNEPHGWFYCLPRFRQGFTCPPNFTSEEKLPQPSHLKGFKEEIAPNGELGFPQKQFLVIDQTGDQTTLIYSSRFGSPVECLGSWDSKLHGCNNFNGNNEPSLRRDVNHVVGLGFGPTFDYKVDENDNHQGTEIESEMHEDTEEINALLYSDSDADGYSTEDDEVTSTGHSPSTMTTHDNQEPFRIGRISEEVASSSPGKTKKRKLFDVAYNHDDVQFTDTANSLKQKRRFNHMGYDDDDAESRCSGSNYGRGSFEMDSLAGTKKMRKEKIQDVLSILQCIVPNGKDKEPVQLLDEAIHCLKSLKLKAKALGLKAL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03406 386 MobiDBLite consensus disorder prediction 232 250 - -
Trre10g03406 386 PANTHER TRANSCRIPTION FACTOR BHLH145 8 384 IPR037546 -
Trre10g03406 386 MobiDBLite consensus disorder prediction 225 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03406 Trre-Chr10 43721030 43722190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03406 77 379 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 31.023 2.41e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03406 - - tpra:123920090 699.893