Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03399 ATGGAAAACGAAGACAACAAGAACAACAACAACAACACGGTGGTTAGAAAACCAAGATTTCTTTGCCTTCATGGATTTCGAACAAGTGGAGAAATCATGAAAAAACAGATTCATAAGTGGCCACAAAATGTTCTTGATAAACTCGATCTTGTTTTTGTCGATGCCCCTTTTCCTTGCAATGGCAAATCTGATGTTGAAGGAATTTTCGATCCTCCTTATTACGAATGGTTCCAATTCAACAAGGAATTTACAGAGTATACTAACTTTGATGAGTGTTTGGAATATATTGAGGATTACATGATCAAACATGGACCGTTCGATGGTCTTCTTGGATTTTCACAGGGGGCTATATTATCAGGTGCGCTGCCAGGTCTTCAAGAGAAGGGTGTGGCACTAAGGAAAGTTCCCAAAGTTAAATTCCTTATAATTATAGGAGGAGCCAAGTTTAAAGCACCTTCAGTTGTGGAGAAAGCATATTCTTCAACAATTGGTTGCCGGTCTCTTCACTTTATAGGAGAAAATGATTTTTTGAAGCAGTATGGAAAAGAACTAATAGAATCGTATGTTGATCCTATGGTAATTCATCACCCAAAAGGACACACAGTACCAAGATTAGATGATAAAAGTTTGAATACCATGATTGGTTTTATTGAAAGAATTCAAAGAGATATATCTGAAAATTAG 684 0.3655 MENEDNKNNNNNTVVRKPRFLCLHGFRTSGEIMKKQIHKWPQNVLDKLDLVFVDAPFPCNGKSDVEGIFDPPYYEWFQFNKEFTEYTNFDECLEYIEDYMIKHGPFDGLLGFSQGAILSGALPGLQEKGVALRKVPKVKFLIIIGGAKFKAPSVVEKAYSSTIGCRSLHFIGENDFLKQYGKELIESYVDPMVIHHPKGHTVPRLDDKSLNTMIGFIERIQRDISEN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03399 227 Pfam Serine hydrolase (FSH1) 16 207 IPR005645 -
Trre10g03399 227 FunFam esterase AGAP003155 14 224 - -
Trre10g03399 227 Gene3D alpha/beta hydrolase 13 224 IPR029058 -
Trre10g03399 227 SUPERFAMILY alpha/beta-Hydrolases 17 203 IPR029058 -
Trre10g03399 227 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 14 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03399 Trre-Chr10 43590513 43597612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03399 3 203 Sulfurtransferasese or Rhodanese AT1G09280 29.437 2.03e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03399 - - lja:Lj1g3v0244710.1 388.652