Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03329 ATGGATCCCAATCTCTCACAGCCACTGTCACCATCAAAACCACGAGCGGAATTGATTTCCCCACCTCCGGCGCCACCGCCTAAACCACTTGATCTACTCACAGCTTCGTTTCCACCATCAAAACCACTATACATCAAACCAACTCTGATGTCATCGCCAAAACCACAAGGTCTGATGGGTTTTGCAGGATCCGAAAATGCGAAATCGTTTTTGACATTTGATCCAGGAGGAAATATCTTCGTCTCCTACTCAGTTTCTCGCCGTTGTCTTCAAATCCGCAACTTTCAAAGCTTTGCGATGATTTTCTCTCCCGCGGTTGAGGTTTTCGATGCCAACCACCGTTCTCTGTCTCCGGCGACGAAATCGCACGACAACACGATTTTGCTTTCTCTTTTGTGTCTGCCTTATGATAGAGGGAAAATGGTGTTTTCGAGCTTCCTATTTCCGGTGGAGAATTTGGCTCCAGCGATGGTCAGAGTAGGTTGCTTTTCTGAGATTTCTCCAGAAACATTGGCAGCTCACCCACTTCTAAATTTTGTATTTAACTCATTGCAGGGGTGTGATGCATCGGTACTTCTTGATTCTGCTCCCTCAAACACTGCAGAGAAAGACTCTCCCGCCAATAAACCAAGTCTTAGAGGGTTTGAAGTTATTGATAATGCCAAGGCTAAACTTGAAGATGTATGCAAAGGAACTGTTTCATGTGCTGACATAGTTGCATTTGCAGCAAGGGACAATGTGGAGTTAGAGCACACACCATTGGATGCTCTCATTGCGCTGCTTTCAGCAGCAGATTATACAACTTCAGCACCACATCAAGCCAGGATCCTAGATTCTACATCATTTGATCTTGCCATTGAAGTTCTTGTTGAACTTGTGACTAAACACGAGATCTTGAAGGCATGTTAA 909 0.4488 MDPNLSQPLSPSKPRAELISPPPAPPPKPLDLLTASFPPSKPLYIKPTLMSSPKPQGLMGFAGSENAKSFLTFDPGGNIFVSYSVSRRCLQIRNFQSFAMIFSPAVEVFDANHRSLSPATKSHDNTILLSLLCLPYDRGKMVFSSFLFPVENLAPAMVRVGCFSEISPETLAAHPLLNFVFNSLQGCDASVLLDSAPSNTAEKDSPANKPSLRGFEVIDNAKAKLEDVCKGTVSCADIVAFAARDNVELEHTPLDALIALLSAADYTTSAPHQARILDSTSFDLAIEVLVELVTKHEILKAC 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03329 302 Gene3D - 154 288 - -
Trre10g03329 302 SUPERFAMILY Heme-dependent peroxidases 170 258 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre10g03329 302 MobiDBLite consensus disorder prediction 1 32 - -
Trre10g03329 302 Pfam Peroxidase 178 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g03329 302 MobiDBLite consensus disorder prediction 15 32 - -
Trre10g03329 302 PANTHER PEROXIDASE 25-RELATED 175 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g03329 302 PRINTS Plant peroxidase signature 232 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g03329 302 PRINTS Plant peroxidase signature 173 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g03329 302 PRINTS Plant peroxidase signature 213 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g03329 302 ProSiteProfiles Plant heme peroxidase family profile. 167 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03329 Trre-Chr10 42907218 42912467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03329 170 253 Peroxidase AT4G33420 60.465 2.04e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03329 K00430 - mnt:21386166 116.701