Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03321 ATGGTTCCACAAAATTCAAGAAATTATTTACCTCCTCATGAAAATTCATACCAAATTCCACAAAACTTTGTCTTACCACAAAATGAAATTCCAAACTTCCATCTAAATAATCTCTTAACCAGCTTACCAACAAACTATCATTATCCATCAGCAGGCCATGAATTTGCACCTCCTTCATGTCTAAGCAGCAACTCAACAACTTCTGATGAAGCAGATGAACTTCAATTCAATATCATCGACGAAAGGAAGCACCGACGAATGATATCAAATAGAGAATCTGCAAGGAGATCAAGGATGAGGAAACAAAAACATTTAGATGAACTTTGGTCACAAGTTGTAAGACTTAGAACTGAAAATAACAACCTTGTTGACAAACTTAACCATGTTTCTGAATCACATGATAAAATTGTTCAAGAGAATGCACGTCTCAAGGAAGAAACTTTTGATCTTCGCCAAATGGTAGCTGATATGCAAATTGGTAACTCTTTTCATTGCAACATGGAAGATTTTGGTGAAATTCCATGCAGCACTTCATCACCAAACAAAGATGATTCCTCTAAAACTCATGATTAA 573 0.3525 MVPQNSRNYLPPHENSYQIPQNFVLPQNEIPNFHLNNLLTSLPTNYHYPSAGHEFAPPSCLSSNSTTSDEADELQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENNNLVDKLNHVSESHDKIVQENARLKEETFDLRQMVADMQIGNSFHCNMEDFGEIPCSTSSPNKDDSSKTHD 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03321 190 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
Trre10g03321 190 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 164 IPR044521 -
Trre10g03321 190 CDD bZIP_plant_GBF1 83 134 IPR045314 GO:0003700|GO:0006355
Trre10g03321 190 Pfam bZIP transcription factor 82 140 IPR004827 GO:0003700|GO:0006355
Trre10g03321 190 Gene3D - 80 135 - -
Trre10g03321 190 Coils Coil 126 146 - -
Trre10g03321 190 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Trre10g03321 190 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Trre10g03321 190 FunFam BZIP transcription factor 80 131 - -
Trre10g03321 190 SUPERFAMILY Leucine zipper domain 82 132 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03321 Trre-Chr10 42812438 42813010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03321 40 173 bZIP Transcription Factor Family AT3G30530 60.563 5.32e-52 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre10g03321 bZIP_1 8.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03321 - - gmx:100778078 260.381