Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03320 ATGGAATTCTCTAACCAGTTCAAAGAATCATTTAGGCATGGTCTTATTGCTGGGTATTGTTTCACTGCAACTTTTGTCATAGTTTTTTATTTGTCCTATTTTCTACCCATACAACTTATCAAGATGTTGAAAATTAAGACCATTGGACATAAGAAAACAGTAAAGATAAGCAAATTGCCTGTTCAAGACTTCAGAAATGAAAAGATCAAAGAGAAACCAAAGAAAGTTAGACAAAAAGCCAAAATCATGCCTATGGAGTTGCTAGACAAAAAAATACAGATCAATAAAGTTGGGAGATTGAGTTATAGAATGGACTTCACAAAACTCTGTCATGCAACAAAAAACTTTAGCATGAACAATGTCATTGGATTTGGAGTAACTGGTATAATGTACAAGGCAACTCTTCCAAATGGTTGTTTCTTGGCGGTTAAGAAACTATATGATTCTCAATTGTCTCTCAAAAGATTTGAGTTAGAAATAATGATATTGGGACAATACAATCATAGAAACATAGTTCCATTGATTGGTTTTTGTATAGAAGAAGGAAAATCTGAATTTTTTTTGGTGTACCAATACATGCCAAATGGAAAGCTTTCTGATAGGTTGAATGAAATTACTACAAAATTAGGATGGAAAATGGTTATTAAAATTGCACTTGGAGTTGCAAGAGGTTTATGTTGCCTCCATCATAGCTTGCATATGGTTCATCTCAATATAAATTCTGACTGTATCTTGCTAGGGAAAAATTTTGAGCCAAAAATATCCAATTTTGGAGGAGCCATGTTTATGAATAATGATTTGAACAAAGACATAGGACTTGACAAGAAGGATGTTTTTGACTTTGGTTGTTTGGTTTTTGAGCTGATTAATGGGAAGAAATTTGGCCAAATATGTGAATATTTAAGCAATACTAATGTTCCTTTATGTGAATATAATCATGTAAATATGTTGGAGGATGACCCTTCAAGATTTTTTGATGCAGTGGATGAATATCTAAACAAGATAGAATTTGAAGATGAGGTATATATTCTTCTTAGAGTTGCACATGAATGTGTTCATCCTTTATCTGAAAAAAGGCCTACTATGTTTGAGGTTTACAACAAGATATGCAACATATGGGAGAAAGATAGAATTTGTGAAAATCCTAACTTCTCATTTATTGATTCTGTTACTCCTACTGTTAGCCTAATATCTAGCTAG 1200 0.3242 MEFSNQFKESFRHGLIAGYCFTATFVIVFYLSYFLPIQLIKMLKIKTIGHKKTVKISKLPVQDFRNEKIKEKPKKVRQKAKIMPMELLDKKIQINKVGRLSYRMDFTKLCHATKNFSMNNVIGFGVTGIMYKATLPNGCFLAVKKLYDSQLSLKRFELEIMILGQYNHRNIVPLIGFCIEEGKSEFFLVYQYMPNGKLSDRLNEITTKLGWKMVIKIALGVARGLCCLHHSLHMVHLNINSDCILLGKNFEPKISNFGGAMFMNNDLNKDIGLDKKDVFDFGCLVFELINGKKFGQICEYLSNTNVPLCEYNHVNMLEDDPSRFFDAVDEYLNKIEFEDEVYILLRVAHECVHPLSEKRPTMFEVYNKICNIWEKDRICENPNFSFIDSVTPTVSLISS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03320 399 Pfam Protein tyrosine and serine/threonine kinase 118 263 IPR001245 GO:0004672|GO:0006468
Trre10g03320 399 SUPERFAMILY Protein kinase-like (PK-like) 100 367 IPR011009 -
Trre10g03320 399 Gene3D Transferase(Phosphotransferase) domain 1 193 386 - -
Trre10g03320 399 ProSiteProfiles Protein kinase domain profile. 116 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g03320 399 Gene3D Phosphorylase Kinase; domain 1 75 192 - -
Trre10g03320 399 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 43 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03320 Trre-Chr10 42803863 42807863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03320 90 375 Receptor kinase-like Gene Family AT1G69990 29.870 1.92e-37 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre10g03320 PK_Tyr_Ser-Thr 4.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03320 - - tpra:123911597 689.493