Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03317 ATGCTCTTACGTGGCATCATCAACGCTCCTCTCCCAACCTCTCCACACATTACCAACTTCAAACCACGAAACGTCACCGTTTCATCCCAACAAAACCTCTCCTACCCACTCTCAATCACCGACGAAGCACTCGAATCACGAGGCTTCATTCTCCGACGAACACCGGAAAATCTCAACCTCGAAGAACTCAACAAAGTATTCGTAGCGGTAGGGTTTCCGCGTCGCGATCCAGAGAAAATTCGCATTGCGCTTGAGAATACGGATGCAATGGTGTGGATTGAAGAGAGAAAAACGCAGAATGCTGTTGCGTTTGCGAGAGCAACTGGTGATGGTGTTTTTAATGCGATAATATGGGATGTTGTTGTTGATCCTTCTTTTCAAGGGATTGGACTTGGGAAAGCTGTTGTTGAGAGGTTGATTGAGGATCTTGTTGGGAGAGGGATTTTGAATATTGCTCTTTATTCTGAGCCTAGAGTTATTGGGTTTTATAGACCTTTGGGTTTTGTTGCTGATCCTGATGGGATTAGAGGAATGGTTTTTTCTAGAAAACCAAAAAGGAAATAG 564 0.4433 MLLRGIINAPLPTSPHITNFKPRNVTVSSQQNLSYPLSITDEALESRGFILRRTPENLNLEELNKVFVAVGFPRRDPEKIRIALENTDAMVWIEERKTQNAVAFARATGDGVFNAIIWDVVVDPSFQGIGLGKAVVERLIEDLVGRGILNIALYSEPRVIGFYRPLGFVADPDGIRGMVFSRKPKRK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03317 187 Pfam Acetyltransferase (GNAT) family 71 168 IPR000182 GO:0016747
Trre10g03317 187 Gene3D - 52 182 - -
Trre10g03317 187 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 49 186 IPR000182 GO:0016747
Trre10g03317 187 PANTHER ACYL-COA N-ACYLTRANSFERASE 16 185 IPR045039 GO:0008080
Trre10g03317 187 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 59 172 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03317 Trre-Chr10 42789996 42790559 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre10g03317 Acetyltransf_1 9.8e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03317 K22450 - jre:108989416 273.092