Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03307 ATGGATCCTTCATTTCTTTTGAAATTTTTTTTTTACATATTGAAAGAAATGGAATGTTCGGTGTTTTCTGATCCTCGTAATGCAGCTTCGATTGTTCGGCTTCACTTCCACGACTGCTTTATTCAGGGATGCGATGGATCGATCTTACTTGATGATACGTACACACTTAAAGGTGAAAAGAAGGCAGCTACCAACATCCACTCTTTAAAAGGGTTTGGAGTTATCGATAAAATCAAGAACTTTGTTGAATCAGAGTGTCCCGGAATTGTTTCTTGTGCCGATATTCTCACAATTGCAGCTAGAGATGCTGTGATTCTGGTTGGTGGACCATATTGGGATGTTCCTGTCGGAAGGAAGGATTCTGTGACGGCAAGTTTTGAACTTGCTAACACCAATCTTCCAACTTCTGATGAGAGCCTTGTCTCTATCATTCCTAAGTTTCTTTATCAAGGCCTATCAGTCACTGATATGGTAGCTCTTGTTGGATCCCACACCATTGGCATGGCAAGGTGTCAGAATTTTCGATCAAGAATATACGGAGACTACGAATCAACTTCCGTGAAAAATCCGATCTCAGATAATCAGCTCAACAATCTGAAATCTATTTGTCCACCAATTGGGGGAGGAGACAATAACATAACAGCAATGGACTACGTGACGCCTAATCTTTTCGACAATTCTTTCTACCAATTACTGTTAAAAGGTGAGGGAGTTCTTAACTCGGATCAAGAAATGTACTCGAGTGTGTTCGGAATTGCAACAAGAGAGCTTGTCAAGAAGTATGCAGAAGACCCTTTGGCTTTCTTTCAGCAATTCTCTGATTCAATGGTCAAAATGGGAAATATCACAAATTCAGAAAGCTTTGTTACTGGAGAAGTTAGAAAGAATTGCAGATTTGTGAACACATAA 909 0.3982 MDPSFLLKFFFYILKEMECSVFSDPRNAASIVRLHFHDCFIQGCDGSILLDDTYTLKGEKKAATNIHSLKGFGVIDKIKNFVESECPGIVSCADILTIAARDAVILVGGPYWDVPVGRKDSVTASFELANTNLPTSDESLVSIIPKFLYQGLSVTDMVALVGSHTIGMARCQNFRSRIYGDYESTSVKNPISDNQLNNLKSICPPIGGGDNNITAMDYVTPNLFDNSFYQLLLKGEGVLNSDQEMYSSVFGIATRELVKKYAEDPLAFFQQFSDSMVKMGNITNSESFVTGEVRKNCRFVNT 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03307 302 ProSitePatterns Peroxidases active site signature. 28 39 IPR019794 GO:0004601
Trre10g03307 302 ProSitePatterns Peroxidases proximal heme-ligand signature. 156 166 IPR019793 -
Trre10g03307 302 Gene3D Peroxidase, domain 2 134 279 - -
Trre10g03307 302 PANTHER PEROXIDASE 72-RELATED 13 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 PRINTS Plant peroxidase signature 70 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 PRINTS Plant peroxidase signature 89 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 PRINTS Plant peroxidase signature 30 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 PRINTS Plant peroxidase signature 231 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 PRINTS Plant peroxidase signature 155 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 PRINTS Plant peroxidase signature 274 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 PRINTS Plant peroxidase signature 108 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 PRINTS Plant peroxidase signature 215 230 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 FunFam Peroxidase 134 279 - -
Trre10g03307 302 Gene3D - 13 301 - -
Trre10g03307 302 SUPERFAMILY Heme-dependent peroxidases 8 301 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 PRINTS Haem peroxidase superfamily signature 28 42 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 PRINTS Haem peroxidase superfamily signature 90 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 PRINTS Haem peroxidase superfamily signature 108 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 PRINTS Haem peroxidase superfamily signature 156 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 PRINTS Haem peroxidase superfamily signature 217 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 Pfam Peroxidase 21 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 ProSiteProfiles Plant heme peroxidase family profile. 12 301 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g03307 302 CDD secretory_peroxidase 7 300 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03307 Trre-Chr10 42639114 42641188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03307 10 302 Peroxidase AT1G68850 71.769 5.55e-162 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03307 K00430 - gmx:100780750 525.398