Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03267 ATGGACACTGTATTTCCCTCACTACTCTCTTTGCTATTTCTAGCAAGAATTTCAGGTCTTGCAGTTGCATTTCTTGTTCTCTTTTGGGCTCTCTCTTTCAAATCTAGCTTCCTCACACCTCCTTTCATTCCCCAACAGGATCTTAACTATGCAGTTCTCCATCCTGTGCTGATGGTAATTGGGTTTATCCTCTTAAGTGGAGAAGCAATTTTGGTACATAGATGGTTACCAGGGACAAGGGGATTGAAGAAATCGGTGCATTTATGCCTTCAAGGGGTGGCATTAGCTTCAGGGATTTTTGGAATTTGGACAAAGTTCAAAGGAGAAGATGGGATTGTGGCAAATTTCTATAGCCTGCATTCATGGATGGGTTTGCTTTGTATATCCCTCTTTGGGGCTCAGTGGCTAATAGGGTTCATGAACTTTTGGCACCGAGGAGAAATGCGAACAGTGAGGATAAGGATCTTACCATGGCATGTATTTGTTGGGCTATACACTTATGCATTGGCAGTAGCAACAGCTGAAACTGGATTACTAGAGAAGTTAACATTCTTGCAAACACAGAGAAATGTATCCAAACACAGCACTGAGTCCATGGTTGTAAATAGTTTAGGCATAGCTCTTGCTCTCCTCAGTGGCTTTGTTATTTTGGCTGCTGTTTCACCTAAGTATCAAATGCTTAATAGCACACTTTTCTATTCAGATACTAGGTGTTTGTCATCTTAA 726 0.4132 MDTVFPSLLSLLFLARISGLAVAFLVLFWALSFKSSFLTPPFIPQQDLNYAVLHPVLMVIGFILLSGEAILVHRWLPGTRGLKKSVHLCLQGVALASGIFGIWTKFKGEDGIVANFYSLHSWMGLLCISLFGAQWLIGFMNFWHRGEMRTVRIRILPWHVFVGLYTYALAVATAETGLLEKLTFLQTQRNVSKHSTESMVVNSLGIALALLSGFVILAAVSPKYQMLNSTLFYSDTRCLSS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03267 241 ProSiteProfiles Cytochrome b561 domain profile. 14 220 IPR006593 -
Trre10g03267 241 Pfam Eukaryotic cytochrome b561 53 184 IPR006593 -
Trre10g03267 241 CDD Cyt_b561_ACYB-1_like 53 186 - -
Trre10g03267 241 Gene3D - 5 229 - -
Trre10g03267 241 SMART 561_7 53 178 IPR006593 -
Trre10g03267 241 PANTHER CYTOCHROME B561-RELATED 9 223 IPR043205 GO:0016491
Trre10g03267 241 FunFam Cytochrome b reductase 1 5 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03267 Trre-Chr10 42248498 42252906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03267 1 241 Chloroplast and Mitochondria Gene Families AT1G26100 63.415 4.77e-101 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03267 K08360 - gmx:100527512 385.571