Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03221 ATGGCCAAGTATCATGTTGTTTTATTCTTCTTTGTGTCTTTGGGTTTGGCATCAATAACTTCTTTCATGTGTGATGCCATTAAAAGTGGTGATGAAACCAATAAACTTTACATTGTATACATGGGCTCACTTCCTAAGGAAGCATCCTATTCTCCATCCTCTCACCATCATAGTATATTGCAACAAGTTATTCATGGTAGTGATCTAGAAAATCGCTTGGTCCAAAGTTACAAAAGGAGTTTTAATGGTTTTTCTGTCATACTCAATGATCAACAAAGGGAAAAACTTGTTGGCATGAAAGGTGTTGTCTCGGTGTTTCCAAGTCAAGAGTATTCCCTTCAAACCACAAGATCGTGGGACTTCCTTGGTTTACCTCAGTCAATCAAAAGAGGTAAAACTGTTGAGAGTGATTTGGTGATTGGAGTTTTAGACACCGGAATTTGGCCAGAATCTAAAAGTTTTAAAGATAAAGGTCTTGGTCCTATTCCAAAAAAATGGAGGGGAGTTTGTGCAGGCGGTGGTAACTTCAGTTGCAATAATAAGATCATCGGAGCACGATGGTACCCTGGAAGTGAGGGTGAGAGTGCAAGAGACCAATTTGGTCACGGAACACATGTGGCATCAATAGTAGGCGGAAGAAAGGTAAAGGGTGTGAGCTATCATGGTCTTGCAAAAGGCACCATAAGAGGTGGAGTTCCATGTTCAAGGATTGCTGTATACAAAGTTTGTAACCCAAAATGTCGTGGTGATAATATTTTAGCAGCTTTTGATGATGCCATTGCCGATGGAGTTGACATCATTAGCATATCTATTGGAAAAGAAAATGCTGTTGAATTTATTAAAGATACTCTTGCTATTGGTTCTTTTCATGCCATGGAAAAAGGAATACTAACAGTGCAGGCATCAGGCAACTATGGTCCTAACCCAAGTACTATTTCAAGCGTAGCACCTTGGTTATTTAGTGTTGCCGCAACTACCATAGATCGTCAATTCATTGATAAACTCATTCTTGGAAATGGAAAGACTTTTATTGGGAAGTCGATTAATGTTGTCTCCTCAAATGGCACAAAATTTCCGATAGTTGTGTGTAATGCTACGTCTTGCCATGGAGATTATACATCCGCTGAAAAATGTCCATGTATAGACACAAAATTGGTAAAGGGTAAGATTGTTTTGAGTGGAGATATAGATGGTGGAGTTTTGGCTTATTCATATGGGGCGATTGGTTCAATCCTTAATTCTACCTTTGATGCGTCTATTACTCATCGACCTTCACTTAACTTGGATTCATTAGACTTTGATCTTGTTCAATCTTACACTTACTCCACTAAATACCCTGTAGCTGAAATACTGAAGAGTGATGTCGTTCAAGACACCACTGCTCCTAAAGTTGCATCTTTCTCTTCTCGTGGTCCAAATCCCATTGTACCAGAAATTATGAAACCAGACATAAGTGCCCCTGGAGTCAATATCTTGGCTGCATATTCACCTAACGGACCAATCCCCGATGAGGTTATTTTTAACGTACATGAGAAATACATTATAGTATCTGGTACCTCTATGGCATGTCCCCATGTTGCAGGAGTTGCCGCATATGTTAAATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCGGCCATCATGACCACGACGAAACCAGTGAATGGTACTTATAATGATATGGTAGGCGAGTCTGCTTATGGATCTGGAAATATCAATCCACAACAAGCTCTTCACCCTGGACTGATTTATGACATCACTAAGCAAGATTATATGCAAATGCTTTGTAATTTTGGTTATAATGATACCAAAGTTGAACAAATTAGTGGAGAAAAATCAAGTTGCCATGAAGCTTCAAATAGATATTTGGTGAAAGATATAAATTATCCTGCGCTGGTGATTCTTGTTAGGCCTCATAAGCGTTTTAGTGCTAAAATTCATAGAACAGTGACAAACGTTGGTTCTCCTAACTCAAGCTACACAGCTACTATCATCCCAATTCCAAAAATCAATATTAAAGTGGTGCCAAAACTTCTCTCATTCAAATCCTTACATGAGAAACAATCATTTGTTGTCATTGCTACTAGAGGAGCAAAATCAAATCAAACTATGTTTTCTTCATCACTTGTTTGGTCTGATGGAACCCACAATGTGAAAAGTCCAATCATTATACAAATTCTCTCTTAA 2193 0.3862 MAKYHVVLFFFVSLGLASITSFMCDAIKSGDETNKLYIVYMGSLPKEASYSPSSHHHSILQQVIHGSDLENRLVQSYKRSFNGFSVILNDQQREKLVGMKGVVSVFPSQEYSLQTTRSWDFLGLPQSIKRGKTVESDLVIGVLDTGIWPESKSFKDKGLGPIPKKWRGVCAGGGNFSCNNKIIGARWYPGSEGESARDQFGHGTHVASIVGGRKVKGVSYHGLAKGTIRGGVPCSRIAVYKVCNPKCRGDNILAAFDDAIADGVDIISISIGKENAVEFIKDTLAIGSFHAMEKGILTVQASGNYGPNPSTISSVAPWLFSVAATTIDRQFIDKLILGNGKTFIGKSINVVSSNGTKFPIVVCNATSCHGDYTSAEKCPCIDTKLVKGKIVLSGDIDGGVLAYSYGAIGSILNSTFDASITHRPSLNLDSLDFDLVQSYTYSTKYPVAEILKSDVVQDTTAPKVASFSSRGPNPIVPEIMKPDISAPGVNILAAYSPNGPIPDEVIFNVHEKYIIVSGTSMACPHVAGVAAYVKSFHPDWSPAAIKSAIMTTTKPVNGTYNDMVGESAYGSGNINPQQALHPGLIYDITKQDYMQMLCNFGYNDTKVEQISGEKSSCHEASNRYLVKDINYPALVILVRPHKRFSAKIHRTVTNVGSPNSSYTATIIPIPKINIKVVPKLLSFKSLHEKQSFVVIATRGAKSNQTMFSSSLVWSDGTHNVKSPIIIQILS 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03221 730 CDD Peptidases_S8_3 111 552 IPR034197 -
Trre10g03221 730 Gene3D - 597 729 - -
Trre10g03221 730 PRINTS Subtilisin serine protease family (S8) signature 517 533 IPR015500 -
Trre10g03221 730 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
Trre10g03221 730 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Trre10g03221 730 ProSitePatterns Serine proteases, subtilase family, histidine active site. 202 212 IPR022398 -
Trre10g03221 730 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 725 IPR045051 -
Trre10g03221 730 Pfam Subtilase family 136 565 IPR000209 GO:0006508|GO:0008236
Trre10g03221 730 CDD PA_subtilisin_like 335 450 - -
Trre10g03221 730 Gene3D - 328 457 - -
Trre10g03221 730 ProSiteProfiles Serine proteases, subtilase domain profile. 118 580 - -
Trre10g03221 730 Pfam Peptidase inhibitor I9 37 113 IPR010259 -
Trre10g03221 730 Gene3D Peptidase S8/S53 domain 137 593 IPR036852 GO:0004252|GO:0006508
Trre10g03221 730 SUPERFAMILY Subtilisin-like 29 618 IPR036852 GO:0004252|GO:0006508
Trre10g03221 730 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 114 IPR037045 -
Trre10g03221 730 FunFam Subtilisin-like protease SBT1.5 137 337 - -
Trre10g03221 730 ProSitePatterns Serine proteases, subtilase family, serine active site. 518 528 IPR023828 -
Trre10g03221 730 Pfam Fibronectin type-III domain 628 726 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03221 Trre-Chr10 41619140 41622202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03221 31 726 Subtilisin-like Serine Gene Family AT3G46850 51.831 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03221 - - psat:127076787 904.049