Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03159 ATGGATTACACAACCCTTATGCTACTCATATCCATTTTGTGGTCAATTATTATTTTTTTCATCACTAGCCATGGAACCAAAACCTCAAAATCATCTTCCAAGCTTCCACCAGGTCCTAGTCCTTATCCTATCATTGGAAACATCTTGGAGCTAGTTGGCACAAATCCTTTAGATGCATTCACTCACCTTTCTAAAATTTATGGACCTATAATTACTCTCAAATTGGGAACTTCAACAACTATAGTGATTTCTTCTCCACAAATAGCCAAAGAAACACTTCACACATATGACATAGTTTTTTCTAGTAGGACTGTCCCAGATGCTGCAAAGTCACTTGATCATCACAAAGTTTCATTGGTATGGATGCCACCATCATCTAAATGGAGAACTCTTAGAAGAGCTTGTGCCACAAAAATATTCTCCAATCAACAACTTGATTCAACAAAATTCCATCGCAAGAGAAAGGTGCAAGACTTGATTAATTATGTGCATAAGTTTTCTGAGAAAGGTGAAGCCTTTGATTTTGGTGAGGTTGTTCTTGCAACAGTTATGAATTCAATATCAGAAACTTTCATTTCTATGGATTTATTTCATTATTGTGGTTCTAGTGATGTTGATAAGAAATCAAAGGAGTTTAAGGAAATGGTATATGGTATTATGGAAGAAGTTGGAAGGCCTAATGTTGTAGATTTTTTCCCTATTTTCAAATTTTTTGACCCACAAGGTGTAAGAAAAAGGATGAGAAAACATTTTGTGAAGTTGATTGCTTTTTTTGATGAAGTGATGGAAGAAAGAATTCGGTTAAGAGATTCTGATCAATGTAAAGAATTCAACGATGTGTTAGATTCATTTCTTGATCTTCTCAAAGAACAGAGTTCTGAATTGTGTCGCCATGATGTATTGCACTTATTTACGGATTTATTTGTAGCTGAAATAGACACAACATCGACCACAGTGGAATGGGCAATGGCAGAGTTGTTACATAACCCAACTAAATTAACAAGACTTAGAGATGAAATTCAACAAATTCATGGGAAATCTGCACAAATTGAAGAATCTGATGCCTCAAATTTACCTTACCTAAGGGCAGTGGTGAAAGAAACATTAAGGCTTCATCCACCAGTTCCATTTCTAGTACCTCACAAATCAAAACATGATGGTGAATTAGCTGGATACATGATACCAAAAGATGCACAAATTCTAGTCAATGTGTGGTCAATAGGAAGAGATTCAAGCATTTGGGCTAACCCAAATTCATTTGAACCTGAAAGATTTTTGAAGATTGAAACAGATTTTAAAGGTAGAGATTTTGAACTTGTTCCATTTGGTGCTGGTAGAAGAATTTGTCCTGGATTACCTTTGGCTTCAAGGTCCATTCACTACATATTGGCCTCTCTTTTGTATCACTTTGATTTGAAGCTAGCTGATGAACTAAAACCTGATGATATGGATATGAGTCATATGTTTGGAGTTACATTACATAAGGCTCAACCTCTTCGAGTTGTACCCATCAGAGCTTAG 1521 0.357 MDYTTLMLLISILWSIIIFFITSHGTKTSKSSSKLPPGPSPYPIIGNILELVGTNPLDAFTHLSKIYGPIITLKLGTSTTIVISSPQIAKETLHTYDIVFSSRTVPDAAKSLDHHKVSLVWMPPSSKWRTLRRACATKIFSNQQLDSTKFHRKRKVQDLINYVHKFSEKGEAFDFGEVVLATVMNSISETFISMDLFHYCGSSDVDKKSKEFKEMVYGIMEEVGRPNVVDFFPIFKFFDPQGVRKRMRKHFVKLIAFFDEVMEERIRLRDSDQCKEFNDVLDSFLDLLKEQSSELCRHDVLHLFTDLFVAEIDTTSTTVEWAMAELLHNPTKLTRLRDEIQQIHGKSAQIEESDASNLPYLRAVVKETLRLHPPVPFLVPHKSKHDGELAGYMIPKDAQILVNVWSIGRDSSIWANPNSFEPERFLKIETDFKGRDFELVPFGAGRRICPGLPLASRSIHYILASLLYHFDLKLADELKPDDMDMSHMFGVTLHKAQPLRVVPIRA 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03159 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Trre10g03159 506 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 SUPERFAMILY Cytochrome P450 31 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 FunFam Cytochrome P450 76C4 27 502 - -
Trre10g03159 506 CDD CYP76-like 64 503 - -
Trre10g03159 506 Pfam Cytochrome P450 36 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 Gene3D Cytochrome P450 21 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03159 506 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 11 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03159 Trre-Chr10 41053200 41056823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03159 5 505 Cytochrome P450 AT2G45550 45.545 6.33e-162 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03159 - - gmx:100809483 630.172