Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre10g03153 | ATGTGTAAGCGAAAGGCAAACATGCTAGTAGAATCTGATACTGAAATTAAAAATTCTATGAGTCCCAACATTGGTGACGTCGTTGAAGATGAATCAACAAATTCATCGACAATTTTTTCTTTGTTTCTCCTATTTGGATTCATTATTAATCCTCGTAAGGGAATTCAACATGCTTACTCATGCAATTTTTGTAGCCGAAAATTCCTTACACCTCAAGCATTAGGCGGCCATCAAAATTCCCACAAATTGGAGAGAAGAATCAAAAGAAGGACCGAAGCTAGTAACCAAGGGGTGGTAAGCCTAAACATTGTGACTCCATACCATGGGGGGTATGGATATCAATATAATGAATTTGACAATATGATTCAGCTTCCAATGTCATCAAATTTTGATGCAAGAAATTTGCTTGTTCCATTGCAGGATATTCCACAGATAGATCAAGTGATCAATGATGCCAATCAAAGCATTGTTAGTCAACAAGCTACTATGACTGAGGTTGACTATGGTTCAATTTCAAATGGGGGTGATGATGTTGATCATGAAGACAAAGACACTCAAGAGGAGAAAGCAATCAAAGATGATTTGATCCTTAAGCTTTGA | 600 | 0.37 | MCKRKANMLVESDTEIKNSMSPNIGDVVEDESTNSSTIFSLFLLFGFIINPRKGIQHAYSCNFCSRKFLTPQALGGHQNSHKLERRIKRRTEASNQGVVSLNIVTPYHGGYGYQYNEFDNMIQLPMSSNFDARNLLVPLQDIPQIDQVINDANQSIVSQQATMTEVDYGSISNGGDDVDHEDKDTQEEKAIKDDLILKL | 199 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre10g03153 | 199 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 59 | 86 | IPR013087 | - | |
Trre10g03153 | 199 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 57 | 135 | IPR044246 | GO:0009788 | |
Trre10g03153 | 199 | MobiDBLite | consensus disorder prediction | 167 | 186 | - | - | |
Trre10g03153 | 199 | Gene3D | Classic Zinc Finger | 46 | 103 | - | - | |
Trre10g03153 | 199 | SUPERFAMILY | beta-beta-alpha zinc fingers | 57 | 87 | IPR036236 | - | |
Trre10g03153 | 199 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 61 | 81 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre10g03153 | Trre-Chr10 | 41005264 | 41005863 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre10g03153 | 48 | 136 | C2H2 Transcription Factor Family | AT1G80730 | 35.955 | 8.74e-12 | 60.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre10g03153 | - | - | mtr:120577076 | 198.749 |