Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03104 ATGAATCACATACCTCGAATTTTCGGTTATAAAAAGCAACAATCAACGGAAATGAACTCGAAGAAGAAGACTCCAAGGAAACAACCGAAATTGGAACGTCGTAATGCCACGAAGAATTTCAACTACGATGCTCAACCGTCGTCGCCGGAATCCACCGAGTCAGCGTCAATTCTCTGCACTCGATCGATGGATTTATACGATAAAAAGAGCTTTCGAGTTGAAGGTGTCGACGGTGAGTTTGACATCATTTGCCGGAGTCTCGGACTTTCAGGACCGGAGGATTTCTCAATTCCGGCGGCGGCTTGGGAGGCAATGAAATTTCGGTCTTCGTCGGATGTTCTTCCGAGGCTGAATTTGTCAGATTTTGATGAAACGAAGATTAGCGAAGAAATTGGAGTTGTAGAATGCGAAGATAGGGTTTCGATTAGAGATTCTCCTGCTGAGACTAGTGGTTGCTGTAACGCGGGCGATGGTAGTGGAAAAGATAGGGTTTCGATTAGGGTTTTTGACGAAGTTAGCAGTAGCTGTACCGGCAATGAAAATAGGGTTCCGATTAGGGGTTTTGTTGAGACGAATGCTTGCTCCACCGGCGGTGGCGGTGGTATCAAGGGATTTAGACCTCCGATGCTAAAGCCGCCGCCGGGTGTTAGGGTTTCTGTTGTAGACAATACGTGTTCCACATGGGATCTTCTGAGGGATTTCGCTCCGGAAGGGGAAGAAAAAGGAAAAGAGAGAGAAGATGTGGAGAAGAAGAAAGATGAAGAAGAAGAAGAGGAAGTTGGTGGAGTGAGATTGAAGATAGAAGAAGAGGAAACTGCTGAGATTATTGGTGAGTTTTCGAGGTCGTGTTCGTTCACTACTTCACACGAAGATGATTCATCGAGCTTTACAACGGATACTAGGTCTAATAGTATATCTCCTAATGTGAGATTCAAGCCAGTTATTACTCCTGGTAGCTGGCAAAAGGGTGATCTTTTGGGGCGAGGTTCATTTGGATCTGTATATGAAGGAATTTCTGAAGATGGATTCTTTTTTGCTGTAAAACAAGTTTCACTGCTTGATCAAGGGAGTCAGGGAAAGCAAAGTGTCGTTCAACTGGAGCACGAAATTGCAGTTTTGAGTCAATTGGAACATGAGAATATAGTTCGATACCTTGGCACTGAAATGGATGAATCAAATCTATATATCTTTATCGAGTTTGTAACCAAAGGTTCGCTTTTAAACCTCTACCGGAGATATAAACTTCGAGATTCCCAAGTATCTGCTTATACGAGACAGATTCTGCATGGTTTAAAGCATCTTCATGATCGCAATATTGTTCACAGGGATATTAAATGTGCAAATATATTGGTCGATGCAAATGGATCTGTCAAGGTTGCAGATTTTGGATTGGCAAAGGCAATTAAATTGAATGATATTAAATCATGCCAGGGAACTGCATTCTGGATGGCACCAGAGGTTGTAAAAGGAAAAGTTAAAGGTTATGGACTTCCAGCTGATATATGGAGTCTAGGATGCACTGTGTTGGAGATGTTAACTGGGAAACTTCCATACTCTCCTATGGAATGTATCACCGCATTGTTTAGAATTGGAAAAGGAGAACTACCTCTGGTGCCTGATTCTCTTTCAAGAGATGCACGTGATTTCATCCTGCAATGTCTTAGAGTTAATCCAGATGACCGTCCCACTGCGGCTCAACTCTTAGACCACAAATTTGTCCAGAGGTCATTCTCCCAGTCATCTGACTCTGCATCTGCATCTCCACATATTCCGAGAAGAGGTTAA 1785 0.4308 MNHIPRIFGYKKQQSTEMNSKKKTPRKQPKLERRNATKNFNYDAQPSSPESTESASILCTRSMDLYDKKSFRVEGVDGEFDIICRSLGLSGPEDFSIPAAAWEAMKFRSSSDVLPRLNLSDFDETKISEEIGVVECEDRVSIRDSPAETSGCCNAGDGSGKDRVSIRVFDEVSSSCTGNENRVPIRGFVETNACSTGGGGGIKGFRPPMLKPPPGVRVSVVDNTCSTWDLLRDFAPEGEEKGKEREDVEKKKDEEEEEEVGGVRLKIEEEETAEIIGEFSRSCSFTTSHEDDSSSFTTDTRSNSISPNVRFKPVITPGSWQKGDLLGRGSFGSVYEGISEDGFFFAVKQVSLLDQGSQGKQSVVQLEHEIAVLSQLEHENIVRYLGTEMDESNLYIFIEFVTKGSLLNLYRRYKLRDSQVSAYTRQILHGLKHLHDRNIVHRDIKCANILVDANGSVKVADFGLAKAIKLNDIKSCQGTAFWMAPEVVKGKVKGYGLPADIWSLGCTVLEMLTGKLPYSPMECITALFRIGKGELPLVPDSLSRDARDFILQCLRVNPDDRPTAAQLLDHKFVQRSFSQSSDSASASPHIPRRG 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03104 594 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Trre10g03104 594 Gene3D Transferase(Phosphotransferase) domain 1 319 590 - -
Trre10g03104 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Trre10g03104 594 FunFam Mitogen-activated protein kinase 1, putative, expressed 318 586 - -
Trre10g03104 594 SUPERFAMILY Protein kinase-like (PK-like) 296 577 IPR011009 -
Trre10g03104 594 SMART serkin_6 320 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g03104 594 MobiDBLite consensus disorder prediction 38 54 - -
Trre10g03104 594 ProSiteProfiles Protein kinase domain profile. 320 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g03104 594 MobiDBLite consensus disorder prediction 16 37 - -
Trre10g03104 594 MobiDBLite consensus disorder prediction 234 262 - -
Trre10g03104 594 MobiDBLite consensus disorder prediction 1 54 - -
Trre10g03104 594 Pfam Protein kinase domain 321 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g03104 594 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 20 588 - -
Trre10g03104 594 Coils Coil 238 258 - -
Trre10g03104 594 PRINTS Tyrosine kinase catalytic domain signature 542 564 IPR001245 GO:0004672|GO:0006468
Trre10g03104 594 PRINTS Tyrosine kinase catalytic domain signature 433 451 IPR001245 GO:0004672|GO:0006468
Trre10g03104 594 PRINTS Tyrosine kinase catalytic domain signature 398 411 IPR001245 GO:0004672|GO:0006468
Trre10g03104 594 PRINTS Tyrosine kinase catalytic domain signature 499 521 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03104 Trre-Chr10 40128983 40140790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03104 11 577 MAP Kinase Kinase Kinase AT4G08500 52.333 4.83e-170 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trre10g03104 Pkinase 4.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03104 K13414 - gmx:100819177 700.664