Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03097 ATGGGATCATCTGGAACAATAAACTCAAGGATAGCTAAGTTTGAAACTGAATATGAAACTTGGGTTGAAGAACAAAATAGACAAAATGAAGAACTAAGAAATGCATTGCAAACTAATGCATCTGATATACAACTTCATCTCCTTGTTGAAAGTAGCTTGAATCAATACTCTAATCTTTTCGGAATGAAAGCAGAAGTCGCAAAGGCTGATGTTTTTTATTTAATCTCGGGAACATGGAAAGCGCCGGTTGAACGCCTTTTTCTTTGGATCGGAGGATACCGACCGTCACAGCTTCTAAATATCGCTGTACCGAAGCTTGATGCTTTAACCGATGCACAAATGGTTAGCATTAACAACCTCCGTATATCCACTCTGCAAACTGAAGATGCTCTATCACAAGGGTTAGAAAAGCTCCAGCAAATAATGATAAAAAACATTCAAGCTGATTCTTTGGATTTTGGATACCATGGCTTTCACGTCGCTGCTGCTATTGACAAAGGAGAAGTCGTCGAAAGTTTTGTAAATCAGGCCGATCACCTTAGGCATCAAACTTTGTTGTTCATGTCTCGCATCCTGACAATTGGGCAGGCTGCTCAAGGTTTGCTGGCTATGGGGGAATACTTTCAACGTCTTCGCGCTCTTAGTTCTTTGTGGAATGCACGTTCATGTGATTATTTCTACCCTACTCAGCATTCAACTTAG 702 0.4046 MGSSGTINSRIAKFETEYETWVEEQNRQNEELRNALQTNASDIQLHLLVESSLNQYSNLFGMKAEVAKADVFYLISGTWKAPVERLFLWIGGYRPSQLLNIAVPKLDALTDAQMVSINNLRISTLQTEDALSQGLEKLQQIMIKNIQADSLDFGYHGFHVAAAIDKGEVVESFVNQADHLRHQTLLFMSRILTIGQAAQGLLAMGEYFQRLRALSSLWNARSCDYFYPTQHST 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03097 233 ProSiteProfiles DOG1 domain profile. 11 221 IPR025422 GO:0006351|GO:0043565
Trre10g03097 233 PANTHER TRANSCRIPTION FACTOR TGA9 6 222 - -
Trre10g03097 233 Pfam Seed dormancy control 30 101 IPR025422 GO:0006351|GO:0043565
Trre10g03097 233 Coils Coil 11 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03097 Trre-Chr10 40053455 40056326 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03097 1 221 Calmodulin-binding Proteins AT1G77920 57.207 2.14e-87 261