Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03095 ATGTTTGAAATTGAATATGGAAGTTGGGTTGAAGAGCAATATCGAAAAAATGAAGAATTAAAACACGCATTGCAATCGAATGCATCTGATACACAGATTCATCAACTTGTTGAGAGTAGCTTGAACCAATACTCAAATCTTTTCCGAATGAAAGCAGAGGCGGCAAAGACCGATGTCTTTTATTTATTCTCTGGCGCATGGAAAACATCGGTAGAATGCCTTTTTCATTGGATTGGAGGATTCCTTCCATCACAACTTCTAAATATCATTGTACCAAAGCTTGAAGATTTAACTGATCAACAAATTGTTAGCATCAACAAACTTCGGTTATGCTGTCAGCAAACTGAAGATGCTCTATCAATAGGGTTAGAAATACTCCAACAAAGTATGATCAACAGCATTCAAGCTGATCCCTTGGATTTCGGAAACAATGGCTTTCAGATGGCTGCTGCCATGGACAAATTAGAAGCATTACAATGTTTTATAATTCAGGCAGATCATCTTAGGCAAGAAACTCTAATGTACATGTCTGATATCCTAACAATTGGGCAAGCTGCTCAAGGCTTGTTGGCAATGGGGGAATACTTTCACTGTATTCGTAATCATGGGACTCATTTGATGGCTAGGATATGA 633 0.3807 MFEIEYGSWVEEQYRKNEELKHALQSNASDTQIHQLVESSLNQYSNLFRMKAEAAKTDVFYLFSGAWKTSVECLFHWIGGFLPSQLLNIIVPKLEDLTDQQIVSINKLRLCCQQTEDALSIGLEILQQSMINSIQADPLDFGNNGFQMAAAMDKLEALQCFIIQADHLRQETLMYMSDILTIGQAAQGLLAMGEYFHCIRNHGTHLMARI 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03095 210 PANTHER TRANSCRIPTION FACTOR TGA9 1 203 - -
Trre10g03095 210 ProSiteProfiles DOG1 domain profile. 1 209 IPR025422 GO:0006351|GO:0043565
Trre10g03095 210 Pfam Seed dormancy control 18 91 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03095 Trre-Chr10 40040703 40042106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03095 2 200 Calmodulin-binding Proteins AT1G22070 54.726 1.06e-74 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03095 K14431 - mtr:112421960 297.745