Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03092 ATGGATCATAACAATTTGCAACAATCAATTTTGGGAGAAACAGCTTTTGAAGATTTTCTAACACATGCTAAAGCTTTTAATATTGGAAACCAAGATAATGTTCATGTTATTGGTGATGCAAATCAAGTTCCCTTCATTGGAATTGAATCAAAGTTAGTCATGGCTTCACAGCCAGAACATTGGTTACCATTTCAAATGCCAATTCCAATACAGATGCAACAACATCAAGAGCATCAGAATCGACCGATAATTGGGATATGTCAAGATTTCAATGTTGCTAAACCGGTTTATGAGAACCAAATTATGGATATTGGTTACTCGGAAAATTCACTTGCCATGTCAATGCCGATAGGGGCAACAACAATGTCATTTCCATTGACTTGTTCAGATTCAAAGGGAGTTGTTGCTGGTGCTGCTACTGACGGTCGTGTCGGTGTTGGAAGAAAGCACAAGTACTCAGATGAGATGATGGAAAAGACTATCGAGAGGAGACAAAAGAGAATGGCAAAGAACCGTGAATCTGCTGCAAGATCAAGGGCAAAGAAACAGTGTATATTCACCATTCTTGTTTATCTGATACTTTAA 585 0.3812 MDHNNLQQSILGETAFEDFLTHAKAFNIGNQDNVHVIGDANQVPFIGIESKLVMASQPEHWLPFQMPIPIQMQQHQEHQNRPIIGICQDFNVAKPVYENQIMDIGYSENSLAMSMPIGATTMSFPLTCSDSKGVVAGAATDGRVGVGRKHKYSDEMMEKTIERRQKRMAKNRESAARSRAKKQCIFTILVYLIL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03092 194 Gene3D - 161 189 - -
Trre10g03092 194 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 7 184 IPR043452 GO:0003700|GO:0045893
Trre10g03092 194 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 166 181 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03092 Trre-Chr10 40004201 40004845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03092 122 184 bZIP Transcription Factor Family AT2G41070 52.381 3.02e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03092 K14432 - gmx:100808654 135.961