Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03091 ATGGATCATAACAATTTGCAACAATCAATTTTGGGAGAAACAGCTTTTGAAGATTTTCTAACACATGCTAAAGCTTTTAATATTGGAAACCAAGATAATGTTCATGTTATTGGTGATGCAAATCAAGTTCCCTTCATTGGAATTGAATCAAAGTTAGTCATGGCTTCACAGCCAGAACATTGGTTACCATTTCAAATGCCAATTCCAATACAGATGCAACAACATCAAGAGCATCAGAATCGACCGATAATTGGGATATGTCAAGATTTCAATGTTGCTAAACCGGTTTATGAGAACCAAATTATGGATATTGGTTACTCGGAAAATTCACTTGCCATGTCAATGCCGATAGGGGCAACAACAATGTCATTTCCATTGACTTGTTCAGATTCAAAGGGAGTTGTTGCTGGTGCTGCTACTGACGGTCGTGTCGGTGTTGGAAGAAAGCACAAGTACTCAGATGAGATGATGGAAAAGACTATCGAGAGGAGACAAAAGAGAATGGCAAAGAACCGTGAATCTGCTGCAAGATCAAGGGCAAAGAAACAGGAACACATAAATAAGTTACACGAGGACAGAGACCGGTTGCAGAAAATAAATATCGAACTCAAAATGAAGAAGGTACACAATGCATACCATTACTCCAATGGGAAATAG 657 0.3866 MDHNNLQQSILGETAFEDFLTHAKAFNIGNQDNVHVIGDANQVPFIGIESKLVMASQPEHWLPFQMPIPIQMQQHQEHQNRPIIGICQDFNVAKPVYENQIMDIGYSENSLAMSMPIGATTMSFPLTCSDSKGVVAGAATDGRVGVGRKHKYSDEMMEKTIERRQKRMAKNRESAARSRAKKQEHINKLHEDRDRLQKINIELKMKKVHNAYHYSNGK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03091 218 CDD bZIP_plant_BZIP46 163 204 - -
Trre10g03091 218 Pfam bZIP transcription factor 163 205 IPR004827 GO:0003700|GO:0006355
Trre10g03091 218 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 166 181 IPR004827 GO:0003700|GO:0006355
Trre10g03091 218 Coils Coil 186 206 - -
Trre10g03091 218 SMART brlzneu 159 217 IPR004827 GO:0003700|GO:0006355
Trre10g03091 218 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 7 206 IPR043452 GO:0003700|GO:0045893
Trre10g03091 218 Gene3D - 161 212 - -
Trre10g03091 218 SUPERFAMILY Leucine zipper domain 163 206 IPR046347 GO:0003700|GO:0006355
Trre10g03091 218 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 161 206 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03091 Trre-Chr10 40004092 40004845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03091 122 208 bZIP Transcription Factor Family AT2G41070 45.977 1.33e-14 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre10g03091 bZIP_1 1e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03091 K14432 - gmx:100808654 163.31