Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03045 ATGAGAGAACAAAGAGTCCTTCATATTGAAGATACTACTCAAATTGAGAGATCTAAGTGGGTTTTGGATTCTCCTAATCCACCACCATTATGGAAAAAAATATTTACTTCATTGAAAGAGACCCTTTTGCCTCATGGAAACAAATTGTGTTTATCTTCCAAGAACAAAACTTTTTATGGACATGCTTACTCTTTCTTGCAGAATTTGTTTCCAATCCTTGTTTGGATTAAAGATTATACTGCATCCAAATTTAAAGATGATTTGTTAGCTGGTTTAACTCTTGCCAGCCTTTGCATACCTCAGAGTATAGGATATGCAAGTTTGGCAAAAGTTGATCCTCAATATGGCCTATATACCAGTATTGTTCCTCCTCTTATATATGCTGTGATGGGGAGCTCAAGAGACATTGCAATTGGACCTGTTGCTGTAGTGTCTATGCTGTTATCTTCATTGGTCACAAAAGTTATAGATCCTGCTGCTAATCCTCATGCCTATAGAGATTTTGTCTTTACTGTCACCTTCTTTACTGGAATTTTTCAAGCTGCATTCGGTATTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCACTAGTTGGATTTATGGCTGGAGCAGCCCTTATTATTGGTCTTCAGCAGCTAAAGGGTCTTTTGGGGATTACTCACTTCACCACCAAAACAGATGCAATTTCAGTACTGGTGTCTGTTTATAAGTCATTACATGAACAAATTACTTCTGAAGAAAAATGGAGCCCTCTGAATTTTGTCCTTGGGTGTTCTTTCTTGATTTTCCTTCTAGTTACCCGATTTATAGCAAGAAGAAAGAATAAACTTTTCTGGTTACCTGCTATTGCTCCTCTTCTATCAGTTATACTATCAACTTTAATTGTGTATTTAACAAAAGCTGATAAGCAAGGAGTTAATATAATAAAGCATGTCAAAGGAGGCCTGAATCAGAGTTCAGTTCACCAGTTACAATTCCATGGTCAAAATGTCGGTCAAGCGGCCAAAATCGGATTAGTTTGTGCAGTTATCGCCCTCACTGAAGCAATGGCTGTTGGTCGATCTTTTGCTTCCATCAAGGGATACCAACTTGATGGGAATAGAGAAATGTTCTCAATGGGAATTATGAACATTGCTGGATCCTTATCTTCATGCTATGTCGCAACTGGATCTTTTTCGAGGACAGCAGTTAATTTCAGTGCAGGATGTCAAACAGCAGTATCAAATATTGTGATGGCAGTTACTGTGATTTTGTTCCTGCAATTATTTGCAAGGCTCTTGTACTACACACCTATGGCTATCCTTGCTGCAATCATCCTCTCTGCACTTCCTGGATTAATCGATATAAACGAGGCTCGCTATATCTGGAAAGTCGACAAATTAGACTTTCTTGCCTGTATTGGCGCTTTCGTTGGCGTCTTGTTTGCATCCGTAGAGATTGGTCTTCTTGTTGCAGTGACAATCTCATTTGCGAAGATACTGATACAATCAATTCGACCTGGAGTAGAAATTCTCGGAAGAGTTCCAAGAACAGAAGCCTTCTGTGATGTTACTCAATATCCGATGGCCACAAGCACGCCAGGCATCATAGTGATCCGCATAAGTTCCGGCTCACTCTGCTTCGCAAATGCAAATTTTGTCAAAGAAAGAATACTGAAGTGGGTCGTGGAAGAAGATGACATTCAAGAAACTTCCAAGGGAAATGTCCGAGCCATAATTATGGACATGACTAACTTGATGAATGTTGATACTTCTGGAATTCTAGCACTAGAGGAATTGCATAAGAGGCTGCTTTCACGCGGCGTAGAATTAGCTATGGTCAATCCAAGATGGCTAGTAATTCATAAGCTCAAGCTTGCACACTTTGTGGACAAAATTGGGAAACAATGGGTTTTTCTGACTGTTGGAGAGGCCGTAGACGCGTGTCTCGCTTCTAAAGTCGCTACCGCTTGA 1962 0.3991 MREQRVLHIEDTTQIERSKWVLDSPNPPPLWKKIFTSLKETLLPHGNKLCLSSKNKTFYGHAYSFLQNLFPILVWIKDYTASKFKDDLLAGLTLASLCIPQSIGYASLAKVDPQYGLYTSIVPPLIYAVMGSSRDIAIGPVAVVSMLLSSLVTKVIDPAANPHAYRDFVFTVTFFTGIFQAAFGIFRLGFLVDFLSHAALVGFMAGAALIIGLQQLKGLLGITHFTTKTDAISVLVSVYKSLHEQITSEEKWSPLNFVLGCSFLIFLLVTRFIARRKNKLFWLPAIAPLLSVILSTLIVYLTKADKQGVNIIKHVKGGLNQSSVHQLQFHGQNVGQAAKIGLVCAVIALTEAMAVGRSFASIKGYQLDGNREMFSMGIMNIAGSLSSCYVATGSFSRTAVNFSAGCQTAVSNIVMAVTVILFLQLFARLLYYTPMAILAAIILSALPGLIDINEARYIWKVDKLDFLACIGAFVGVLFASVEIGLLVAVTISFAKILIQSIRPGVEILGRVPRTEAFCDVTQYPMATSTPGIIVIRISSGSLCFANANFVKERILKWVVEEDDIQETSKGNVRAIIMDMTNLMNVDTSGILALEELHKRLLSRGVELAMVNPRWLVIHKLKLAHFVDKIGKQWVFLTVGEAVDACLASKVATA 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03045 653 NCBIfam sulfate permease 71 641 IPR001902 GO:0016020|GO:0055085
Trre10g03045 653 SUPERFAMILY SpoIIaa-like 528 645 IPR036513 -
Trre10g03045 653 CDD STAS_SulP_like_sulfate_transporter 523 638 - -
Trre10g03045 653 FunFam Sulfate transporter 31 502 648 - -
Trre10g03045 653 ProSiteProfiles STAS domain profile. 539 645 IPR002645 -
Trre10g03045 653 Pfam STAS domain 523 641 IPR002645 -
Trre10g03045 653 Gene3D STAS domain 502 649 IPR036513 -
Trre10g03045 653 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Trre10g03045 653 Pfam Sulfate permease family 84 470 IPR011547 GO:0016020
Trre10g03045 653 PANTHER SULFATE TRANSPORTER 55 646 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03045 Trre-Chr10 39487285 39491468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03045 14 650 Inorganic Solute Cotransporters AT5G10180 62.344 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03045 K17469 - gmx:100776591 1075.85