Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02914 ATGGCTACAAACAAATCAGCACCTACTATTCTGTTTGCTACCAAAAGCCAGATTATCTTTGCATTTCATCTTCAATATGCCAAGCACCTCACACAGGTTATTACATGCAAAGCTGCAATATGTTGGGAGGCAGGAAAACCAGTGACAGTGGAAGAGATACAAGTAGATCCACCAAAGGAAAATGAAGTTCGAGTTAAGATGCTTTGTGCCAGTCTCTGCCACACAGACATCTCAAGCATTCAAGGATTTCCACATAATCAATTCCCCCTAGCACTTGGACATGAAGGAGTTGGTGTTATAGAGAGTGTTGGTGATGAAGTGACAAATCTGAAAGAAGGGGATATTATAATTCCAACATATGTAGGGGAATGTCAATAA 378 0.4048 MATNKSAPTILFATKSQIIFAFHLQYAKHLTQVITCKAAICWEAGKPVTVEEIQVDPPKENEVRVKMLCASLCHTDISSIQGFPHNQFPLALGHEGVGVIESVGDEVTNLKEGDIIIPTYVGECQ 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02914 125 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 93 107 IPR002328 GO:0008270|GO:0016491
Trre10g02914 125 SUPERFAMILY GroES-like 31 124 IPR011032 -
Trre10g02914 125 Gene3D - 21 125 - -
Trre10g02914 125 PANTHER ALCOHOL DEHYDROGENASE 32 125 - -
Trre10g02914 125 Pfam Alcohol dehydrogenase GroES-like domain 61 124 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02914 Trre-Chr10 37748190 37750594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02914 60 125 Monolignol Biosynthesis Gene Families AT2G21890 41.429 9.29e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02914 K00121 - gmx:100798341 176.792