Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02911 ATGCCAACACTCTCCAATTTCTACACCATTCAAGATGTATCCCAACACAAATCCAAAGACGATTGCTGGATCATTGTTGATGGAAAGGTATATGATGTGACAAAATATTTGGATGATCATCCTGGTGGAGATGATGTTATCCTCGAAGCAACCGGGAGAGATGCAACTGAGGATTTTGAAGATGCTGGCCACAGCAAAAGTGCAAGAGAACTTATGGAGCAGTATTATATTGGTGAGTTTGACACGTCGTCTCCGATTGCAACCAAGAAAGGTTTTTCTGAAAGGTTTGCGCAGCTGAAAAAGAAACAATATTTGGGACTTTCGGTAGCTGTAGTTGGCATCTCAGTGATTGTTGGTTTCTTATACTTACGGAAGAAGTAA 381 0.4094 MPTLSNFYTIQDVSQHKSKDDCWIIVDGKVYDVTKYLDDHPGGDDVILEATGRDATEDFEDAGHSKSARELMEQYYIGEFDTSSPIATKKGFSERFAQLKKKQYLGLSVAVVGISVIVGFLYLRKK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02911 126 Coils Coil 124 126 - -
Trre10g02911 126 FunFam Cytochrome b5 type B 3 85 - -
Trre10g02911 126 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Trre10g02911 126 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Trre10g02911 126 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Trre10g02911 126 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Trre10g02911 126 Gene3D - 3 85 IPR036400 -
Trre10g02911 126 PANTHER CYTOCHROME B5 4 118 - -
Trre10g02911 126 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Trre10g02911 126 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Trre10g02911 126 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 80 IPR001199 -
Trre10g02911 126 SMART Cyt_b5_2 8 81 IPR001199 -
Trre10g02911 126 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 88 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02911 Trre-Chr10 37711355 37715131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02911 1 125 NADPH P450 reductases AT1G26340 50.000 1.15e-44 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02911 K23490 - gmx:100500537 190.274