Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02890 ATGGGAGCATTACACACTTATACATTGGATAAGGTAAGTCTCGGTGCAAAACAATTGATTTATCATTTGTTGCAAAGAGATCCAAGTAGCAGATTAGGTTCAAAGGGAGGAGCAAATCATATTAAAAACCATTCATTCTTCAGAGGTGTCAATTGGGCCCTAGTTAGATGCACGAGTGGAGGAGCAAGTAGGTTTACTTTACATACATTCAGTTCATGCAGGACGCTACTATGCTCTCATACAAGTCCACTTTCAAATCAATGGTATGTACTATTTTGA 279 0.3835 MGALHTYTLDKVSLGAKQLIYHLLQRDPSSRLGSKGGANHIKNHSFFRGVNWALVRCTSGGASRFTLHTFSSCRTLLCSHTSPLSNQWYVLF 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02890 92 Gene3D Transferase(Phosphotransferase) domain 1 10 55 - -
Trre10g02890 92 SUPERFAMILY Protein kinase-like (PK-like) 9 70 IPR011009 -
Trre10g02890 92 PANTHER FLIPPASE KINASE 1-RELATED 11 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02890 Trre-Chr10 37508642 37511219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02890 12 59 AGC Kinase Gene Family AT5G58140 70.833 4.54e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02890 K20715 - gmx:100804524 80.4925