Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02875 ATGTCTCCAGAGTTTCATCTTCTTCTTTTCCCTGACCTAGTTTACATTCAGCCACTCACTCTCACTTTCCAAACCGCCCTTTGCTTCTTTCTCTTTGTTCTCGGATTCCTTTTCTGGCTCACTCCCGGTGGGTTTGCTTGGGCTTTGTACAACAAAGCTTCATCTTCAGCCCATGCTGTTATCCCAGGCCCATCTTTTACTGGTTTCTCTACTCTTTTGTCAGGAGAAACTCCTCACCGTGTTTTAGCCAAACTAGCTAAGAGTCACCATGCTCAGTCTTTGATGGCTTTTTCTGTTGGTCTAACCCGGTTCATTATTTCAAGTGAACCAGAAACTGCTAAAGAAATCCTCTGCAGTTCTGCTTTTGGTGATAGACCAGTTAAAGAATCAGCTTACGAGCTTTTGTTTCACAGAGCAATGGGTTTTGCACCGTACGGTGAATATTGGAGGAATCTGAGAAGGATTTCATCGACCCATTTGTTTTGTCCTAGAAGGATTAACGGGTTTGAAGGATTTAGGATTGAGGTTGGTTTAAAAATGGTGAAAAGGTTAAATTTTTTGATGAGTGAAATGGGTAGTGTTGGGGTGAAAAAAGTTCTTCATTTTGGGTCACTTAATAATGTAATGATGACTGTGTTTGGGAAAAGTTATGATTTTTTTGAGGGTGATGGTGTTGAACTTGAAGAGTTGGTGAGTGAAGGGTATGAGTTATTGGGTATTTTTAACTGGAGTGATCATTTTCCTCTACTTGGTTGGTTGGATTTACAAGGTGTTAGGAAAAGGTGTAGAGTTTTGGTTACCAAGGTTAATGCTTTTGTTGGTAAGATCATTATGGAACATAAAATGAAGAGAATGTTTCAAGGAAGAGCTTTAGTTGGTGATTTTGTTGACGTTTTGCTTGATTTAGAGGAAAAAGACAAACTCAGTGATTCTGATATGATTGCAGTTCTTTGGGAAATGATTTTTAGAGGAACAGACACAGTTGCTATATTACTGGAATGGATTTTGGCAAGGATGGTTCTACATCAAGATATACAAGCTAAAGCACAAGAAGAAATTGATGGTGTTGTTAAAGATTCCAAAGTTGTTACTGATGCTGATGTTCAGAACATGCCTTACTTACAATGCATTGTGAAAGAAGCATTAAGGGTGCATCCACCAGGACCACTTTTATCATGGGCTCGTTTATCTGTCCATGATGTTATGGTAGGTGACAAGTTTGTTCCGAAAGGCACAACTGCTATGGTGAATATGTGGGCCATAACTCATGATGAAAAAGTGTGGAATGAGCCAGAGAAGTTTAATCCAGAAAGGTTCATGAATGAAGATGTTAGTATTATGGGATCTGATTTAAGGTTGGCACCTTTTGGAGCTGGTAGAAGAGTTTGTCCTGGAAAAGCTATGGGTTTAGCTTCTGTTCATCTTTGGCTTGCTCAGTTACTTCAAAGCTTCAAATGGATTCCATGTGATGATTCATCTGTTGATTTGGAAGAATGTCTTAAGCTTTCTATGGAGATGAAAAAACCACTTGTGTGCAAGGTTGTTCCTAGGACCTAG 1557 0.3937 MSPEFHLLLFPDLVYIQPLTLTFQTALCFFLFVLGFLFWLTPGGFAWALYNKASSSAHAVIPGPSFTGFSTLLSGETPHRVLAKLAKSHHAQSLMAFSVGLTRFIISSEPETAKEILCSSAFGDRPVKESAYELLFHRAMGFAPYGEYWRNLRRISSTHLFCPRRINGFEGFRIEVGLKMVKRLNFLMSEMGSVGVKKVLHFGSLNNVMMTVFGKSYDFFEGDGVELEELVSEGYELLGIFNWSDHFPLLGWLDLQGVRKRCRVLVTKVNAFVGKIIMEHKMKRMFQGRALVGDFVDVLLDLEEKDKLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHQDIQAKAQEEIDGVVKDSKVVTDADVQNMPYLQCIVKEALRVHPPGPLLSWARLSVHDVMVGDKFVPKGTTAMVNMWAITHDEKVWNEPEKFNPERFMNEDVSIMGSDLRLAPFGAGRRVCPGKAMGLASVHLWLAQLLQSFKWIPCDDSSVDLEECLKLSMEMKKPLVCKVVPRT 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02875 518 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g02875 518 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g02875 518 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g02875 518 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g02875 518 Pfam Cytochrome P450 75 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g02875 518 FunFam Cytochrome P450 78A5 53 517 - -
Trre10g02875 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Trre10g02875 518 CDD CYP78 90 510 - -
Trre10g02875 518 SUPERFAMILY Cytochrome P450 66 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g02875 518 PANTHER CYTOCHROME P450 78A7-RELATED 20 518 - -
Trre10g02875 518 Gene3D Cytochrome P450 50 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g02875 518 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g02875 518 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g02875 518 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g02875 518 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g02875 518 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g02875 518 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g02875 518 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02875 Trre-Chr10 37358811 37360452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02875 1 518 Cytochrome P450 AT1G13710 64.952 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02875 K20619 - qsu:111986572 717.227