Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02861 ATGGAAGAAAGACAAGGCCAGTATTATGTTTCCAGTCCACCTGAGTCTGATTTTAACAGGCAAGTGAATCGCAGGGCTGGTATAACAGGCCTGAAGCAGAGAGCTCATGGAAGTCGCTCTTGGATTAAAATTGATCAGGATGGAAATTCTGAGATTGTGACACTTGACAAAGCTACTATTATGAGACATTGTTCTTTGCCTTCTAGAGATCTTCGACTATTGGATCCAAAGTTCATTTATCCTTCTTCAATATTAGGAAGGGAGATGGCTATTGTAGTCAACCTTGAGCAGATCCGGTGTATAATCACTGCCGACGAAGTCATCCTGATGAATTCACTGGATGGTACTGTTGGTCGGTACAGGTCACAATTATGCAATCGGCTCCGGAGAGAAAAATCTGATGATCTTCCCTTTGAATTTAGGGCACTGGAGTTAGCTCTGGAATTGACATGCACATCTTTAGATGCTCAGGTAAATGAACTAGAGTTGGAAATATATCCCGTGCTCGATGAACTAGCCTCATCTATCAGTACCCTCCTTCTGGAACGTGTTCGAAGATTTAAAGGTCACCTCCTTGCATTGACTCAGCGTGTTCAGAAGGTTCGTGATGAAATAGAACATCTCATGGATGACGATGGTGACATGGCTGAGATGTGCCTGACTGAGAAAAGGAGAAGATCAGATGCTTCTCTTTCAAATGATTGTTTTCAAACTTGTACTTCAACAGGTAGAGTGATTTCAAAATCAGCCCCTAATTCACCAGAGAGGTCAGTTAGTGGGCTACAGATGTTGCCAAGGACTTTCAGCGGCATTGCAAATTCAAGTAAATATGGTAGTTCAACGGGTTCATCTGATAATGAAGAAAGGATTCAGCCTCTGGAGATGTTGTTGGAAGCATACTTTATTGTCATTGATAATACTCTCAACACATTATCGTCGCTCAAAGAATACATCGATGACACGGAAGATTTTCTCAACATAAAATTGGGAAATATTCAAAACCTCCTAATAAAGTTTGAGATGCTTCTTACAGCAGCCACATTGGTAGCTGCAATATTTGCAGCCGTGGCAGGAGTATTTGGAATGAATTTTGAAACCTCTGTTTTTGATTACCCATCTGGATTCAATTGGGTTATGGTAATTACTGGAATTGCTTGTGTAGCATTGTATTTTGCCTTACTATTCTATTTTAGGTACAAAAAGGTGCTTCCAGAATAA 1218 0.4064 MEERQGQYYVSSPPESDFNRQVNRRAGITGLKQRAHGSRSWIKIDQDGNSEIVTLDKATIMRHCSLPSRDLRLLDPKFIYPSSILGREMAIVVNLEQIRCIITADEVILMNSLDGTVGRYRSQLCNRLRREKSDDLPFEFRALELALELTCTSLDAQVNELELEIYPVLDELASSISTLLLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKRRRSDASLSNDCFQTCTSTGRVISKSAPNSPERSVSGLQMLPRTFSGIANSSKYGSSTGSSDNEERIQPLEMLLEAYFIVIDNTLNTLSSLKEYIDDTEDFLNIKLGNIQNLLIKFEMLLTAATLVAAIFAAVAGVFGMNFETSVFDYPSGFNWVMVITGIACVALYFALLFYFRYKKVLPE 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02861 405 Gene3D - 28 112 - -
Trre10g02861 405 FunFam Magnesium transporter MRS2-1 343 403 - -
Trre10g02861 405 FunFam Magnesium transporter MRS2-1 29 112 - -
Trre10g02861 405 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 341 393 IPR045863 -
Trre10g02861 405 Coils Coil 191 211 - -
Trre10g02861 405 CDD Mrs2_Mfm1p-like 41 402 IPR039204 -
Trre10g02861 405 Gene3D Magnesium transport protein CorA, transmembrane region 116 336 - -
Trre10g02861 405 Gene3D Magnesium transport protein CorA, transmembrane region 343 403 - -
Trre10g02861 405 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 22 403 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02861 Trre-Chr10 37233188 37235675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02861 17 404 MRS2 Gene Family AT2G03620 63.980 1.30e-167 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02861 K16075 - gmx:100803935 629.017