Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02841 ATGTCTTCTGTAACAAACCCAGTTCTCATATCAGTTCAAAGACCTCAAATTTCTTCACTTTTTTTGTTATCAAAAAGAGTTTCAACTTCAACTAGTTATGGATTGTTGAAGTCAAGAACACTTCAACAACATGAGGCTAAATATCCAAGCTTAGCTTTCTCTCCATTGGTGAAGGGGTTGAGATTAAGAGAGAGAAGGTTTCCAGTTGTTGCAGCCTTAGCAGCAGATGCTGGTGATAGTGAAATTGGAATCACAAATGGGTCTGTCCAATCCTCAAAGAGTTTTGGAGAGAAATTTCCTGCATTGGTAACTGGTTTCTTTTTCTTTATGTGGTACTTCTTAAATGTGATTTTCAACATACTCAACAAGAAAGTCTACAATTATTTTCCATATCCATATTTTGTTTCTGTTGTACATCTCCTTGTAGGAGTGGTATATTGCCTTATCAGCTGGGGTGTAGGTCTACCAAAACGCGCACCAATGAATAAAGAACTCTTGCTTCTATTGACTCCAGTTGCATTTTGTCATGCCCTTGGTCATGTCATGTCTAATGTATCATTTGCTGCAGTTGCTGTGTCATTTACACATACTATAAAAGCTTTGGAGCCATTTTTCAATGCTTCAGCTTCCCAGTTTGTGTTAGGCCAACATATTCCTATCTCTTTGTGGCTATCTTTAACCCCTGTTGTTCTAGGTGTATCAATGGCATCACTAACTGAATTGTCTTTCAATTGGACTGGTTTCATTAGTGCTATGATTTCAAATATAGCATTTACATACAGAAGTTTATATTCTAAGAAAGCAATGACTGGAATGGACAGTACAAATGTATATGCGTATATTTCAGTGATTGCGCTCGCCTTTTGTATCCCACCAGCAATACTTATTGAGGGACCCCAACTCATGGAATTTGGATTTAAAAATGCTATTGCAAAAGTAGGACTGATCAAGTTTTTGTCTGATCTTTTCTGGATTGGAATGTTTTACCATCTTTATAATCAGCTTGCTACTAATACTTTGGAACGTGTTGCACCATTAACACATGCAGTTGGAAATGTGTTGAAGAGAGTTTTTGTCATTGGATTCTCTATTGTGGTTTTTGGCAACAAGATCTCCACACAAACTGGCATTGGCACTGCTATTGCAATTGCAGGTGTTGCCATATATTCTCTAATAAAAGCAAACATGGAAGAGCAAAAACGGAAAGCTGCTGCTGCTGCAGCCCTTGCATCTTAA 1236 0.377 MSSVTNPVLISVQRPQISSLFLLSKRVSTSTSYGLLKSRTLQQHEAKYPSLAFSPLVKGLRLRERRFPVVAALAADAGDSEIGITNGSVQSSKSFGEKFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVVHLLVGVVYCLISWGVGLPKRAPMNKELLLLLTPVAFCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNASASQFVLGQHIPISLWLSLTPVVLGVSMASLTELSFNWTGFISAMISNIAFTYRSLYSKKAMTGMDSTNVYAYISVIALAFCIPPAILIEGPQLMEFGFKNAIAKVGLIKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKANMEEQKRKAAAAAALAS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02841 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 239 - -
Trre10g02841 411 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 102 400 IPR004696 GO:0016020|GO:0022857|GO:0055085
Trre10g02841 411 PANTHER SOLUTE CARRIER FAMILY 35 105 397 - -
Trre10g02841 411 Pfam Triose-phosphate Transporter family 103 390 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02841 Trre-Chr10 37067660 37071191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02841 54 401 Antiporters AT5G46110 76.638 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02841 K15283 - pvy:116132902 598.201