Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02836 ATGTCCGCTGAAAAAGAGAGAGAGACCCAAGTTTACTTGGCCAAGCTTTCTGAACAGGCTGAAAGATATGAAGAAATGGTTGAATGTATGAAGAAAGTGGCAAAACTTGATGTTGAACTAACTGTGGAAGAGAGGAACCTCCTCTCGGTTGGATATAAAAATGTCATTGGTGCACGAAGAGCCTCATGGCGCATTATGTCATCAATTGAGCAGAAGGAAGAGGGCAAGGGTAATGAGCACAATGTTAAACTGATCAAAAGTTACTGCCAGAAGGTCGAGGAGGAGCTCTCCAAAATCTGCGGTGACATTCTGACTATTATTGACCAGCATTTGGTTCCTTCTTCCACCTCAGCCGAAGCTAATGTTTTCTACCATAAGATGAAAGGTGATTATTTCCGGTATCTTGCTGAGTTCAAGACTGACCAAGAGAGGAAAGAGGCTGCTGAGCAGTCACTGAAAGGATATGAGGCTGCTTCAGCCACTGCAAACACTGATCTTCCATCAACACATCCAATTCGTCTTGGACTCGCACTCAACTTCTCTGTCTTTTATTATGAGATCATGAACTCTCCTGAAAGGGCCTGCCATTTGGCCAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGATACCTTGAGTGAAGAGTCGTACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTCTGGACCTCTGATTTGCCAGAGGATGGAGGTGAGGAAAACATCAAAGCTGAAGAAGCCAAACCTGCTGAACCTGAGGTATGTGTAAGATAA 789 0.4423 MSAEKERETQVYLAKLSEQAERYEEMVECMKKVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEEGKGNEHNVKLIKSYCQKVEEELSKICGDILTIIDQHLVPSSTSAEANVFYHKMKGDYFRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENIKAEEAKPAEPEVCVR 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02836 262 FunFam 14-3-3 protein epsilon 1 249 - -
Trre10g02836 262 Coils Coil 13 33 - -
Trre10g02836 262 PIRSF 14-3-3 1 248 IPR000308 -
Trre10g02836 262 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
Trre10g02836 262 MobiDBLite consensus disorder prediction 241 262 - -
Trre10g02836 262 Coils Coil 195 215 - -
Trre10g02836 262 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Trre10g02836 262 SMART 1433_4 7 249 IPR023410 -
Trre10g02836 262 Pfam 14-3-3 protein 13 235 IPR023410 -
Trre10g02836 262 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Trre10g02836 262 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Trre10g02836 262 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Trre10g02836 262 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Trre10g02836 262 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Trre10g02836 262 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Trre10g02836 262 MobiDBLite consensus disorder prediction 240 262 - -
Trre10g02836 262 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Trre10g02836 262 Gene3D - 1 249 IPR036815 -
Trre10g02836 262 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02836 Trre-Chr10 37039061 37042365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02836 3 256 14-3-3 family AT1G26480 84.556 3.24e-163 451