Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02794 ATGCTACCGATCTCCAACACCCACGAGCAAACGGCGGCGGACAGGAAGGAAGAAAACGAAAACGAAACAGGGGCGTCGGAGGAGGAGGAAACAGCGGCGGCCACCATAACCCAAACGAGACCTGGATCGGTGATACGGAGCATGGGGCTCGTCGCACCACCACCAACAGCGGCTACACAAGCACCAAAGACCGCCGGAGAAGAAAACAAAAGAAACACCCACACATTCGAAACAGGACACAGAACAGAGATCGTGACCGGCCGAACCAAGGAAGGGAATTGGCGATTATATTTCGGTTGTGTTCGGATTATACCTTATGTTCGTGACGGTCTCAAGCTTTATAAGGATCGGTTTCTTTCGTCGTTGCCGGCTGCTCGCCGTGCTAGTGCTGATTTTACTCGTCCGGTGTTTATGGCTGTTGCTTTTTATTTATGTGCTAAGAAACACAAGCTCAAAGTTGATAAGATTAAGCTAATTGAACTCTGTGGTACATCTGAATCTGAATTTTCCAGTGTTTCTACTACTATGAAAGATTTGTGCCATGATGTTTTTGGAGTAGCTAAAGAAAAGAAAGATCCTAAAGAAGTTAAGAATAATATAGATCTGCTTGATGACCAAGCAAAAGAAAAGCTGAGGACGGTGGCTATTTGTTCGATGATGGAGCAGAGGTTTCAAGTTATAAAAAAAGGAAACAGACAGAAACACGTGATTATGAGAAGTGGAAATCTTCAGTCCTTTTTACATCCAATAAACAAGATAAGAAAGAAGTGCCTAGCAAGAAACCAATACAGACTCGCCTCAACTTTGTTAAGGAAGCTCCTGAGATCCAGAAGTTGGAGGCAATACCACCTATGTCATATAAGGATGCGTGCATTGCTATCAATGGAGGAAACCATAATGAGGTTGTATCTGTTACTGCTACTGATTGCAGCATTGAATCAATTGATCATGTTGGTGGTACAGCTTCTCTAG 972 0.4393 MLPISNTHEQTAADRKEENENETGASEEEETAAATITQTRPGSVIRSMGLVAPPPTAATQAPKTAGEENKRNTHTFETGHRTEIVTGRTKEGNWRLYFGCVRIIPYVRDGLKLYKDRFLSSLPAARRASADFTRPVFMAVAFYLCAKKHKLKVDKIKLIELCGTSESEFSSVSTTMKDLCHDVFGVAKEKKDPKEVKNNIDLLDDQAKEKLRTVAICSMMEQRFQVIKKGNRQKHVIMRSGNLQSFLHPINKIRKKCLARNQYRLASTLLRKLLRSRSWRQYHLCHIRMRALLSMEETIMRLYLLLLLIAALNQLIMLVVQLL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02794 323 Gene3D - 95 183 - -
Trre10g02794 323 MobiDBLite consensus disorder prediction 28 44 - -
Trre10g02794 323 CDD Orc6_mid 98 183 - -
Trre10g02794 323 MobiDBLite consensus disorder prediction 1 73 - -
Trre10g02794 323 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 98 214 IPR020529 GO:0005664|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02794 Trre-Chr10 36523348 36529113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02794 98 204 Core DNA Replication Machinery Family AT1G26840 71.963 2.22e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02794 K02608 - gmx:100777539 180.259