Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02759 ATGGAGAGCACAAGATTATGTCAATGGTTAAAGTTAAATCTTGTGGTGATTGTATTGGTATTTTTAAAGGCAGAAGCTGGTTTTGCACCAATCACTATTGTCCAAAGCGCGGTAGCAAAGGGAGCTGTTTGCTTGGATGGTAGTCCACCAGCTTACAATTTTCAGAAGGGATATGGAACAGGAATTAACAGTTGGTTAGTTCACATGGAGGGAGGAGGATGGTGCAACAATGTCACTTCTTGCCTTGCTCGTAAGATGACGCGTTTAGGTTCATCGACGAAAATGGGAAATACACTTGCATTTTCAGGAATATTAAATGACAACAAACAATTTAATCCAGATTTCTACAATTGGAATAGAATTAAGATTAGATATTGTGATGGTTCATCTTTTACTGGTGATGTGGAAGCAGTCAATCCAGTAACTAAGTTGCATTTTAGAGGTGCAAGAATTTTTGAAGCTGTCATGGAGGAATTGCTATCAAAAGGAATGAAAAATGCTCAAAATGCAATTATCTCAGGATGTTCAGCTGGAGGATTAACTTCATTATTGCATTGCGATCGCTTTCGAGCTCTTCTTCCCGGAGGAGCTAAAGTGAAATGTATCTCAGATGCCGGATACTTTATCAATGTAAATGATATATCAGGAGCACAAACCATTGAGCAATACTTCAATCAAATTGTTACCACACATGGTTCTACTAAGAATTTGCCTAGATCATGCACTTCAAGACTCAAACCAGAGCTGTGCTTTTTTCCTCAATATTTTGTATCACAAATCACTACACCAATTTTCTTCGTAAATTCGGAAATCGACTCATGGCAGATTAAGCATATTTTGGCACCAAATGCTGCTGATTGGCATGAATGCAAGTTAGATATAAAGAAATGTACTCCTGCTCAACTAAATCAAATCCAAGGCTTTAGAGCAGAATTCCTAAAGGCAATAACTCCTATAGGCAACTCTCCATCCAAAGGAATGTTCTTAGACTCTTGCTATAACCACTGTCAAACCGAATTGCAGGAACTATGGTTGTATAATGGCTCTCCGTTGTTGGCCAAGACACCGATTGCAAAAGCTGTAGCTGATTGGTTTTATGACAGAAGCCCTTTCCATCAGATAGATTGTCCTTATCCATGCAATCCAACTTGTGGTAACCACGTTCTTGAAGATCCAGAATTATAG 1185 0.3873 MESTRLCQWLKLNLVVIVLVFLKAEAGFAPITIVQSAVAKGAVCLDGSPPAYNFQKGYGTGINSWLVHMEGGGWCNNVTSCLARKMTRLGSSTKMGNTLAFSGILNDNKQFNPDFYNWNRIKIRYCDGSSFTGDVEAVNPVTKLHFRGARIFEAVMEELLSKGMKNAQNAIISGCSAGGLTSLLHCDRFRALLPGGAKVKCISDAGYFINVNDISGAQTIEQYFNQIVTTHGSTKNLPRSCTSRLKPELCFFPQYFVSQITTPIFFVNSEIDSWQIKHILAPNAADWHECKLDIKKCTPAQLNQIQGFRAEFLKAITPIGNSPSKGMFLDSCYNHCQTELQELWLYNGSPLLAKTPIAKAVADWFYDRSPFHQIDCPYPCNPTCGNHVLEDPEL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02759 394 PANTHER NOTUM-RELATED 18 386 IPR004963 GO:0016787
Trre10g02759 394 SUPERFAMILY alpha/beta-Hydrolases 143 282 IPR029058 -
Trre10g02759 394 Pfam Pectinacetylesterase 23 370 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02759 Trre-Chr10 35870677 35874527 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02759 5 389 Carbohydrate Esterase AT4G19420 59.198 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02759 K19882 - gmx:100818146 621.698