Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02755 ATGCCAAGCAATGATACTTTTGCTTTTGTTCGACAAATTACTTCACTTTTCAAACTTCCTGTCATCATGATGTCTCTTGATCCCACACCATCTTCTGTTATGAATTCTATTGCTGAAGGGGCTTGCGCATACTGGTCCAAGCCCTTGGATGAGGAGAATCAATTCAAGAACATGTGGCAACATGTTGTACGAAACACTATGAGTGAAAGTCAGCTCCATGTTGTACGGAAGGCTTTGAGCGAAAGTCCTGAACTTCCTCAAACCTTGGAGGTTAAAGGCCATAAAAAACGAGGAAGAGAAGATGTTGATGTACCAAAACCACCTCTTGCAAAGAAAAGCCGTTTGTCATGGACACCTGAATTGCGCGAACAATTCTTATCAGCTGTGAATCAACTCGGGGTTAATAATGCAGTGCCGAAAGAAATTCTGAAACGGATGAATTTTCCCGGTTTGACATCAGGGCATGTAGCTAGCCATTTACAGAAGTATAGAAACTATCTGAGAGGTGGAATCAGAAAGTCAAAGAAGTTGAGTGGATTTGATTTTGAAGGTCACGACAAAATTCGTACACAACAACATTGCACTGAAATCGTCGAATCCAACATTTTTTCTGATTTATCTGACTTGTTCCCAGATCTTGTTGATGAGTTTTAA 654 0.4052 MPSNDTFAFVRQITSLFKLPVIMMSLDPTPSSVMNSIAEGACAYWSKPLDEENQFKNMWQHVVRNTMSESQLHVVRKALSESPELPQTLEVKGHKKRGREDVDVPKPPLAKKSRLSWTPELREQFLSAVNQLGVNNAVPKEILKRMNFPGLTSGHVASHLQKYRNYLRGGIRKSKKLSGFDFEGHDKIRTQQHCTEIVESNIFSDLSDLFPDLVDEF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02755 217 Pfam Myb-like DNA-binding domain 114 164 IPR001005 -
Trre10g02755 217 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 168 IPR017930 -
Trre10g02755 217 ProSiteProfiles Response regulatory domain profile. 1 62 IPR001789 GO:0000160
Trre10g02755 217 FunFam Two-component response regulator 109 169 - -
Trre10g02755 217 Gene3D - 1 77 - -
Trre10g02755 217 SUPERFAMILY CheY-like 1 79 IPR011006 -
Trre10g02755 217 SUPERFAMILY Homeodomain-like 110 168 IPR009057 -
Trre10g02755 217 NCBIfam myb-like DNA-binding domain, SHAQKYF class 112 165 IPR006447 GO:0003677
Trre10g02755 217 Gene3D - 109 169 - -
Trre10g02755 217 MobiDBLite consensus disorder prediction 85 108 - -
Trre10g02755 217 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 90 193 IPR044841 GO:0003700|GO:0006355
Trre10g02755 217 MobiDBLite consensus disorder prediction 88 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02755 Trre-Chr10 35800315 35801358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02755 1 193 Response Regulator Gene Family AT2G01760 37.156 8.43e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre10g02755 Myb_DNA-binding 1.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02755 - - tpra:123923208 280.796