LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre10g02701	ATGTTGGATGGTAGGATTGCTCTGGATACAAATAAAGAAATTGTCAATTTAGAAAGTGACAAAATTGACAGTCCCATACCAGACAAAGTTATTGATTATGAAGAAATTAATTCTAAGAAAACTGATGTTAATCTGCCAGCCCCTAGTAGTGCTAAGAAAGGTAATTCCAACAATCAATCTCCTGTCTCCCAACAGAACAGATTTTCACTCTTAGAAGAAGAAAATAGAGAAACAGTCCATCAAAATACACCTCAACCTCACCTACAACAAATCAACCACACATCCAGTTTTCCTTTTGTCCCTGGCAATGCACAATTTTCAGTGAACCCTATCCACAACTCTGTGTTGTCTCCTGTGTTAACACCTGTTTTAACCCCTGTCCATAACTCTGTCAAACCTCCCACCATGGCACCAGTTTGGGCTTATGGACCTACAGTTGATGAAGTATCTAAGTGTAATAGCTCTAGTATTGAAGTTAATAAGAAGGCTAGGGTTCATCCATCTTCATGCCAACCACCTCTAAAGGCCAGGGTTTTGCCATCTTCAAGCCAACCACCTCTAAAGGTGAGGAAGAAGTTAAGTGATATAATAACAGACCTGCACCAGCTAGTTGCCCCATTTGGAAAGGAACTTGATGATCCCCTCACCATAATCTACGAAAAGAAAATCTCAAGTATAAATGCCATAGTTGAAGTATTAGAGTTAGCTTTGAAAGCCTACTTCACTTTTTTCACCCCTTTTTTCATATATTGCATTGAATCTGTTTCACAAAGTTCGAAGTCAGTCTCTATTTTGCAAGGTGCGTGTTAA	810	0.3901	MLDGRIALDTNKEIVNLESDKIDSPIPDKVIDYEEINSKKTDVNLPAPSSAKKGNSNNQSPVSQQNRFSLLEEENRETVHQNTPQPHLQQINHTSSFPFVPGNAQFSVNPIHNSVLSPVLTPVLTPVHNSVKPPTMAPVWAYGPTVDEVSKCNSSSIEVNKKARVHPSSCQPPLKARVLPSSSQPPLKVRKKLSDIITDLHQLVAPFGKELDDPLTIIYEKKISSINAIVEVLELALKAYFTFFTPFFIYCIESVSQSSKSVSILQGAC	269

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre10g02701	269	MobiDBLite	consensus disorder prediction	42	69	-	-
	Trre10g02701	269	MobiDBLite	consensus disorder prediction	37	96	-	-
	Trre10g02701	269	MobiDBLite	consensus disorder prediction	81	96	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre10g02701	Trre-Chr10	35197478	35201594	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre10g02701	147	241	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT4G29100	39.796	1.55e-06	47.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre10g02701	-		-	cpap:110818634	62.003