Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02694 ATGGCGATAATAATCGAACTATACCCCATATTCTTCTTCCCCCAAAACCCAATTCCAAAACCCTTCATAAACCCTAATTTCAATCCCAAAAGTAAAAAATCTTATCAAATTTCCAAACCAATTGCTCAATTTTCTCATCAACCAACAACCACCACCTCAAACCGTGGTATAATTTTCCGGGAAAAAGTTCTTTACCTCCAGAAACTCAAAGTGAATCCAGAAAAAGCCTTCAAACAAAACCCTAATCTTCGATCTTGTCCTCTAACAACCCTAGAATCAGTTGAACAATGTCTTTCATCAATTGGCATACAAAGAAGCCAAATGGGTCGAATTCTCGATATGCTTCCTCAACTTCTCACGTGTGAACCACACAATGACATTTACCCCCTTATTGATTTTCTTCTCGATGAGGTTGAAATTCCTTACAATCATGTTCAAAAATCAATCTTGCGGTGTCCTAGATTGTTGGTTAGTAGTATTGAGAATCGATTAAGACCTGCACTTTGTTATTTGAAGGAATTAGGGTTTGTTGGGTCACATTCTCTCACGTGCCAAACTACATTGCTTTTGGTTTCAAGTGTTGAGGGTACCCTTATCCCTAAAGTTGAGTTTTTGATGGGTTTGGGGTTCACACGTGCTGAGGTTTCGAAAATGGTTTTGAGGTCACCTGCGTTGTTGACTTATAGTGTGGCTAATAATTTGGTTCCAAAACTTGATTTTTTCTTGAATGAGATGAATGGTGATATTACGGAATTGAAAAAGTATCCTCAGTATTTCTCTTTTAGCTTGGAAGGGAGGATTAAGCCGAGACATGCTATGTTGGTTCAGCTTGGTTTATCGCTTCCTTTGCCAGAAATGTTGCAGGTTAGTGATGGAGGGTTTGATTCTATGTTGCTTGAATTGCGATTTAGGGAACTTGAGGTACATTCAGGGTAG 936 0.3878 MAIIIELYPIFFFPQNPIPKPFINPNFNPKSKKSYQISKPIAQFSHQPTTTTSNRGIIFREKVLYLQKLKVNPEKAFKQNPNLRSCPLTTLESVEQCLSSIGIQRSQMGRILDMLPQLLTCEPHNDIYPLIDFLLDEVEIPYNHVQKSILRCPRLLVSSIENRLRPALCYLKELGFVGSHSLTCQTTLLLVSSVEGTLIPKVEFLMGLGFTRAEVSKMVLRSPALLTYSVANNLVPKLDFFLNEMNGDITELKKYPQYFSFSLEGRIKPRHAMLVQLGLSLPLPEMLQVSDGGFDSMLLELRFRELEVHSG 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02694 311 PANTHER CGI-12 PROTEIN-RELATED 57 295 IPR003690 GO:0003690|GO:0006355
Trre10g02694 311 Pfam mTERF 59 172 IPR003690 GO:0003690|GO:0006355
Trre10g02694 311 Pfam mTERF 140 294 IPR003690 GO:0003690|GO:0006355
Trre10g02694 311 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Trre10g02694 311 SMART mt_12 180 211 IPR003690 GO:0003690|GO:0006355
Trre10g02694 311 SMART mt_12 216 248 IPR003690 GO:0003690|GO:0006355
Trre10g02694 311 SMART mt_12 109 141 IPR003690 GO:0003690|GO:0006355
Trre10g02694 311 SMART mt_12 74 104 IPR003690 GO:0003690|GO:0006355
Trre10g02694 311 SMART mt_12 249 280 IPR003690 GO:0003690|GO:0006355
Trre10g02694 311 Gene3D Transcription termination factor 3, mitochondrial 74 309 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02694 Trre-Chr10 35099683 35100618 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre10g02694 mTERF 1.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02694 K15032 - gmx:100785219 360.533