Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02652 ATGGATCCAACGGTGAAAAAGCTCCAAATCCGTTCCACAAATCTCTTCGCTCGCAACAACAACAACAACAATTCAAAATGTTTCTTTTTCAACAACGCGTTCATCGCTTCTCTCTTTTTCTCATTCCTCCTCATTTTTTCATATTACACTTTCTTTAATTCTCCGTCATCGGGAACCGGTTTCCGGTACCGGATTATTATCGACGGTGGAAGTACGGGAACTAGGGTTCATTTATTTAAATATAAGGTTAAAAATGCGTTGGATTTTGGGAAAAAAGGGTTGGATTCGATGAGAGTGAATCCGGGTTTATCGTCGTTTGCGGAGGATCCGGATGGAGCGGGTAGGTCAGTTTTGGAGCTGGTGGAGTTTGCGAAAAATCGGATCCCGAAGGAGAGCTGGAGGGAGACGGAGATTCGGCTTATGGCTACTGCTGGGATGAGGATGTTGGATATTGAAGTGCAGGAGAAGATTCTAGATTCTTGTAGGAAGGTTTTGCGTTCTTCTGGATTCAAGTTTAGTGATAATTGGGCTTCTGTTATAACAGGTTCTGATGAAGGAGTGTATGCTTGGGTTGTTGCTAATTATGCACTTGGAACTCTGGGAGGTGATCCTTTGGAGACAACTGGGATTATCGAACTTGGTGGTGCTTCTGCTCAGGTGACCTTTGTATCAAGAGAAGCGATGCTGCCTTTGTTCTCGCGCACCGTTAAATTTGGGAATGTCACTTACAACCTTTACAGCCACAGCTTGCTTCATTTTGGCCTGAATGTTGCTCATGACTCATGGAGAGAAGCAATTACATCAGGAGATTTAAACTTGGCTTCTCAATATATTCAGAAGGGGTTGCACATAGATCCTTGTACTCCTGCAGGGTACTCTTATAATGTTGATTCATGGAAGTCGTCTCCTAGCTCACACAGTGAAAAAAACCAACATCAGCCCACTGTCCAAACAAAGGGAAACTTTTCGGAGTGCAGATCTGCAGCATTGAAGCTATTACAGAAAGGGAAAGAATCATGTTCTTATCAGCATTGCGACATTGGATCAAATTTTATACCTAAGCTTCAGGGGAAATTTTTGGCTACAGAAAATTTCTTTCACACATCAAAGTTTTTTGGGTTGGGGCCACATGCCTATCTGTCCAAGTTGATGACTGCTGGGCAAGAATACTGCGGAGAGGATTGGTTAAAGCTGAAGAAAAAATATATCTCCCATGATAGGGAAGATTTACTTCGACATTGCTTCTCTTCGGCTTACATTGTTGCTCTGCTTCATGACAGTCTTGGGATTGGTATGGATGATGAGAGGATCAAAGTTGCTAGTCAGGTGGGAAATATTCCGCTCGATTGGGCTTTGGGAGCTTTTATTATGCAAACTACAGCAGATGCAGATCCACAGAACCATAACTGGATTTCCGCCATTTTCAGCAATGAATCACCTACTCTCTTCTCACTTCTTGGAATATTTATAATATTGTTGTTTACAGCATGGTCTATATCTAGGTGCAGGAAACCTCAGTTGAAGACTATTTATGACCTAGAAAAGGGACGTTATATAACTACGCGAGTTGGTAGATAA 1578 0.4227 MDPTVKKLQIRSTNLFARNNNNNNSKCFFFNNAFIASLFFSFLLIFSYYTFFNSPSSGTGFRYRIIIDGGSTGTRVHLFKYKVKNALDFGKKGLDSMRVNPGLSSFAEDPDGAGRSVLELVEFAKNRIPKESWRETEIRLMATAGMRMLDIEVQEKILDSCRKVLRSSGFKFSDNWASVITGSDEGVYAWVVANYALGTLGGDPLETTGIIELGGASAQVTFVSREAMLPLFSRTVKFGNVTYNLYSHSLLHFGLNVAHDSWREAITSGDLNLASQYIQKGLHIDPCTPAGYSYNVDSWKSSPSSHSEKNQHQPTVQTKGNFSECRSAALKLLQKGKESCSYQHCDIGSNFIPKLQGKFLATENFFHTSKFFGLGPHAYLSKLMTAGQEYCGEDWLKLKKKYISHDREDLLRHCFSSAYIVALLHDSLGIGMDDERIKVASQVGNIPLDWALGAFIMQTTADADPQNHNWISAIFSNESPTLFSLLGIFIILLFTAWSISRCRKPQLKTIYDLEKGRYITTRVGR 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02652 525 Gene3D - 62 456 - -
Trre10g02652 525 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 38 465 IPR000407 GO:0016787
Trre10g02652 525 Pfam GDA1/CD39 (nucleoside phosphatase) family 62 461 IPR000407 GO:0016787
Trre10g02652 525 Gene3D Exopolyphosphatase. Domain 2 181 444 - -
Trre10g02652 525 CDD NBD_sugar-kinase_HSP70_actin 65 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02652 Trre-Chr10 34555932 34563244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02652 38 459 Nodulin-like Gene Family AT4G19180 28.035 2.92e-43 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02652 K01510 - gmx:100807287 771.155