Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02651 ATGCGACGATTGAATGCTCGAAATCGGGTTGATTCAAATCCAAAGCAAATGGATCCAACGGTGAAAAAGCTCCAAATCCGTTCCACAAATCTCTTCGCTCGCAACAACAACAACAACAATTCAAAATGTTTCTTTTTCAACAACGCGTTCATCGCTTCTCTCTTTTTCTCATTCCTCCTCATTTTTTCATATTACACTTTCTTTAATTCTCCGTCATCGGGAACCGGTTTCCGGTACCGGATTATTATCGACGGTGGAAGTACGGGAACTAGGGTTCATTTATTTAAATATAAGGTTAAAAATGCGTTGGATTTTGGGAAAAAAGGGTTGGATTCGATGAGAGTGAATCCGGGTTTATCGTCGTTTGCGGAGGATCCGGATGGAGCGGGTAGGTCAGTTTTGGAGCTGGTGGAGTTTGCGAAAAATCGGATCCCGAAGGAGAGCTGGAGGGAGACGGAGATTCGGCTTATGGCTACTGCTGGGATGAGGATGTTGGATATTGAAGTGCAGGAGAAGATTCTAGATTCTTGTAGGAAGGTTTTGCGTTCTTCTGGATTCAAGTTTAGTGATAATTGGGCTTCTGTTATAACAGGTTCTGATGAAGGAGTGTATGCTTGGGTTGTTGCTAATTATGCACTTGGAACTCTGGGAGGTGATCCTTTGGAGACAACTGGGATTATCGAACTTGGTGGTGCTTCTGCTCAGGTGACCTTTGTATCAAGAGAAGCGATGCTGCCTTTGTTCTCGCGCACCGTTAAATTTGGGAATGTCACTTACAACCTTTACAGCCACAGCTTGCTTCATTTTGGCCTGAATGTTGCTCATGACTCATGGAGAGAAGCAATTACATCAGGAGATTTAAACTTGGCTTCTCAATATATTCAGAAGGGGTTGCACATAGATCCTTGTACTCCTGCAGGGTACTCTTATAATGTTGATTCATGGAAGTCGTCTCCTAGCTCACACAGTGAAAAAAACCAACATCAGCCCACTGTCCAAACAAAGGGAAACTTTTCGGAGTGCAGATCTGCAGCATTGAAGCTATTACAGAAAGGGAAAGAATCATGTTCTTATCAGCATTGCGACATTGGATCAAATTTTATACCTAAGCTTCAGGGGAAATTTTTGGCTACAGAAAATTTCTTTCACACATCAAAGTTTTTTGGGTTGGGGCCACATGCCTATCTGTCCAAGTTGATGACTGCTGGGCAAGAATACTGCGGAGAGGATTGGTTAAAGCTGAAGAAAAAATATATCTCCCATGATAGGGAAGATTTACTTCGACATTGCTTCTCTTCGGCTTACATTGTTGCTCTGCTTCATGACAGTCTTGGGATTGGTATGGATGATGAGAGGATCAAAGTTGCTAGTCAGGTGGGAAATATTCCGCTCGATTGGGCTTTGGGAGCTTTTATTATGCAAACTACAGCAGATGCAGATCCACAGAACCATAACTGGATTTCCGCCATTTTCAGCAATGAATCACCTACTCTCTTCTCACTTCTTGGAATATTTATAATATTGTTGTTTACAGCATGGTCTATATCTAGGTGCAGGAAACCTCAGTTGAAGACTATTTATGACCTAGAAAAGGGACGTTATATAACTACGCGAGTTGGTAGATAA 1626 0.4225 MRRLNARNRVDSNPKQMDPTVKKLQIRSTNLFARNNNNNNSKCFFFNNAFIASLFFSFLLIFSYYTFFNSPSSGTGFRYRIIIDGGSTGTRVHLFKYKVKNALDFGKKGLDSMRVNPGLSSFAEDPDGAGRSVLELVEFAKNRIPKESWRETEIRLMATAGMRMLDIEVQEKILDSCRKVLRSSGFKFSDNWASVITGSDEGVYAWVVANYALGTLGGDPLETTGIIELGGASAQVTFVSREAMLPLFSRTVKFGNVTYNLYSHSLLHFGLNVAHDSWREAITSGDLNLASQYIQKGLHIDPCTPAGYSYNVDSWKSSPSSHSEKNQHQPTVQTKGNFSECRSAALKLLQKGKESCSYQHCDIGSNFIPKLQGKFLATENFFHTSKFFGLGPHAYLSKLMTAGQEYCGEDWLKLKKKYISHDREDLLRHCFSSAYIVALLHDSLGIGMDDERIKVASQVGNIPLDWALGAFIMQTTADADPQNHNWISAIFSNESPTLFSLLGIFIILLFTAWSISRCRKPQLKTIYDLEKGRYITTRVGR 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02651 541 Gene3D Exopolyphosphatase. Domain 2 197 460 - -
Trre10g02651 541 Pfam GDA1/CD39 (nucleoside phosphatase) family 78 477 IPR000407 GO:0016787
Trre10g02651 541 Gene3D - 78 472 - -
Trre10g02651 541 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 54 481 IPR000407 GO:0016787
Trre10g02651 541 CDD NBD_sugar-kinase_HSP70_actin 81 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02651 Trre-Chr10 34555932 34563292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02651 12 475 Nodulin-like Gene Family AT4G19180 27.071 1.67e-43 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02651 K01510 - gmx:100807287 780.015