Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02622 ATGGATATCTCACAGATCGCAAAGAAACTCGGATTATCCGATTCCAAACTCCTCATCCGTAAAGCCGCCGAACTCCGTCGCCTCTGCGATGTCCATTTCGATTCCTCCATCATCGGCGTCGGTGAGGTTGCCAAAGCAATCATCTGTATGGAAATCGCTGCAACGAGGCTTGGTGTTCTCTTTGATCGATCCGCTGCGGTGAAGCTAAGTGGAATGTCTGAAAAAGCTTATATCAGATCCTATAATTCACTTCACAATGGCATCGGAGTCAAGTTGAAGCTAGATGTGAGGGAATTGGCGATTCAATTTGGTTGTGTTCGGATTATACCTTATGTTCGTGACGGTCTGAAGCTTTATAAGGATCGGTTTCTTTCTTCGTTGCCGGCTGCTCGCCGTGCTAGTGCTGATTTTACTCGTCCGGTGTTTATGGCTGTTGCTTTTTATTTATGTGCAAAGAAACACAAGCTCAAAGTTGATAAGATTAAGCTAATTGAACTCTGTGGTACATCTGAATCTGAATTTTCCAGTGTTTCTACTACTATGAAAGATTTGTGCCATGATGTTTTTGGGGTAGCTAAAGAAAAGAAAGATCCTAAAGAAGTTAAGACTAATAGAGATCTGCTTGATGTCTTACCAAGCAAAAGAAAAGCTGAGGACGGTGGCTATTTGTCCGATGATGGAGCAGAGGTTTCAAGTTATAAAAAAAGGAAACAGACAGAAACACGTGATTATGAGAAGTGGAAATCTTCAGTCCTTACATCCAACAAACAAGATAAGAAAGAAGTGCCTAGCAAGAAACCAATACAGACTCGCCTCAACTTTGTTAAGGAAGCTCCTGAGATCCAGAAGTTGGAGGCAATGTAA 864 0.4213 MDISQIAKKLGLSDSKLLIRKAAELRRLCDVHFDSSIIGVGEVAKAIICMEIAATRLGVLFDRSAAVKLSGMSEKAYIRSYNSLHNGIGVKLKLDVRELAIQFGCVRIIPYVRDGLKLYKDRFLSSLPAARRASADFTRPVFMAVAFYLCAKKHKLKVDKIKLIELCGTSESEFSSVSTTMKDLCHDVFGVAKEKKDPKEVKTNRDLLDVLPSKRKAEDGGYLSDDGAEVSSYKKRKQTETRDYEKWKSSVLTSNKQDKKEVPSKKPIQTRLNFVKEAPEIQKLEAM 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02622 287 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 276 IPR020529 GO:0005664|GO:0006260
Trre10g02622 287 FunFam Origin recognition complex subunit 6 92 188 - -
Trre10g02622 287 CDD Orc6_mid 93 188 - -
Trre10g02622 287 MobiDBLite consensus disorder prediction 217 266 - -
Trre10g02622 287 MobiDBLite consensus disorder prediction 217 270 - -
Trre10g02622 287 Pfam Origin recognition complex subunit 6 (ORC6) 4 91 IPR008721 GO:0003677|GO:0005664|GO:0006260
Trre10g02622 287 Gene3D - 92 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02622 Trre-Chr10 33899054 33901739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02622 1 282 Core DNA Replication Machinery Family AT1G26840 67.254 5.49e-135 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02622 K02608 - gmx:100777539 458.373