Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02619 ATGGATTTGAACACCCCAATACGATCCAACACGACACCCCTCTCTAGCTCAGTCTTCAAATCTAAACTCATTTTCTTACATGAATGGTGGCTCATGAAGCCTCAAAACCAATGCAAGGGTTTAGCTCTTGCTGGCATTGCTTCAATGGAGAGAGAAAGAATGTTTTTTTCCTCTGTGATTGTAAAGAGACATGAACCCAATGTTGTAGAGACGGAAGATGGCGTCACAATAATCATCCGTGGTTTTATTAACTCCTCTTGTACATCTCAAAATGGATTTCCTTCCGACGTATGTCGCCGGTTCTCAGTTGGATTTCCACACAATTGGAAAAATTATTCAGCTGACAGTTCAGGAAATGAATGTCAATATGTGGATAGAGTTACCGGTTTTGATGACTCAAATGCTTCTTCCCACAAACAAACAGCTGATGAGACTTCTCATGAAGTTATGGAAGCTGCAGATAACGACAATATTGTGAGTATTAGGTTGTCTCAACCGCAGGTTGGCGTGGTTTATAATGGTGAAAATGCAGTCTCGTGTCTTAACGACTTACATACTTCTTCCCACAAAAAGACAGCTGATGAGATTTCTCATGAAGCTATGGAAGCTGAAGATAACAACAATATTACGAGTATTAGGTTGTCTCAACCGCAGGTTGGCGTGGCTTATAATGGTGAAAATAGAGTCTCAGATGTTGACGACTTAAATGCTTCTTGCCACAAAAAGACAGCTGATGTGACTTCACAGGAAGCTATGGAAGCTGAAGATAACAACAATATCGGGGGTCTTAGGTTATCTCAACCGCAGGTTGATTTGATTAATAATGGTGAAAATGGAGTCTCAATTGCTGCTGCAGCCGAAAGTAATCAATCTTTGATGGGTGTGTTTGAATTTGATCCTATCCATGAGCAAAGCAATGTTAGGTCTCCACTTTACCCAAAGAAATTGGAATTTGAACAGCTATCAAGTGACCGCAAGGAGAAAAAACGTATCAAGAAGAAGATTGTAGAGAATACTAGTAGTTTGTGTAGCAGGGTCCTGACAAGAAGCATTGCCAAAAAAAGTCACATGATGCTTAAAATGGATGGGATAGCTGAAGTTAAATGTTCTAGTTGTCCTGTTAGAAGATCTCCAAGGATATATAGGTGTAGTTGGCATAGGATTTGGGGGCCCTTTGGAATGTTCAAATTGGTGCCTCAGGAAGCATATTCTATAAGTTTTGGAGTTTGCTTCTTTTGGTTTACCCTTTTTTGGGTTGTTGAATTAAAGATAGGGTCTTGCTAA 1284 0.4003 MDLNTPIRSNTTPLSSSVFKSKLIFLHEWWLMKPQNQCKGLALAGIASMERERMFFSSVIVKRHEPNVVETEDGVTIIIRGFINSSCTSQNGFPSDVCRRFSVGFPHNWKNYSADSSGNECQYVDRVTGFDDSNASSHKQTADETSHEVMEAADNDNIVSIRLSQPQVGVVYNGENAVSCLNDLHTSSHKKTADEISHEAMEAEDNNNITSIRLSQPQVGVAYNGENRVSDVDDLNASCHKKTADVTSQEAMEAEDNNNIGGLRLSQPQVDLINNGENGVSIAAAAESNQSLMGVFEFDPIHEQSNVRSPLYPKKLEFEQLSSDRKEKKRIKKKIVENTSSLCSRVLTRSIAKKSHMMLKMDGIAEVKCSSCPVRRSPRIYRCSWHRIWGPFGMFKLVPQEAYSISFGVCFFWFTLFWVVELKIGSC 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02619 427 Pfam SANTA (SANT Associated) 24 112 IPR015216 -
Trre10g02619 427 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 18 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02619 Trre-Chr10 33866404 33869038 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre10g02619 SANTA 2.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02619 - - tpra:123906974 603.208