Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02509 ATGAGAAACAACACAATCGGCAACAACGACTATGATGACTACATGAGCAACAACACAACCGGAGACAACGACTATGGCAACTACAACACAACTGGAGACTGCAGCGCCTACATGAGCAACATCAAAACCAGTAACAAAGACAATGACGACTCCATGAGCGATAACACAACCGACAACAACGACTATGGTGACTACACGAGCAACAACACAACCAGCAACAAAGACTACGACGATTCCATGAGCAACTACCACGGGAAAAACAATAGCAACGGGAATACTACTACAGCAGGTGGAAAAAATGTTGAGTGTGATGTATGTCACAAAACATTTGCTGATGAGGAAGCTCAAAAAGATCACATGGAGGCAAAACATGGTGGAAAGTTCAAGTGTTTTAAGTGCGACCGTGGCTTTGCAACAAAAGAGAGAAGGACCGAGCATATGAACAGTGGAATATGCAGTAAAAAATAA 468 0.4295 MRNNTIGNNDYDDYMSNNTTGDNDYGNYNTTGDCSAYMSNIKTSNKDNDDSMSDNTTDNNDYGDYTSNNTTSNKDYDDSMSNYHGKNNSNGNTTTAGGKNVECDVCHKTFADEEAQKDHMEAKHGGKFKCFKCDRGFATKERRTEHMNSGICSKK 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02509 155 SMART c2h2final6 101 124 IPR013087 -
Trre10g02509 155 SMART c2h2final6 128 148 IPR013087 -
Trre10g02509 155 ProSiteProfiles Zinc finger C2H2 type domain profile. 101 129 IPR013087 -
Trre10g02509 155 SUPERFAMILY beta-beta-alpha zinc fingers 100 147 IPR036236 -
Trre10g02509 155 ProSitePatterns Zinc finger C2H2 type domain signature. 103 124 IPR013087 -
Trre10g02509 155 Gene3D Classic Zinc Finger 73 150 - -
Trre10g02509 155 MobiDBLite consensus disorder prediction 45 99 - -
Trre10g02509 155 MobiDBLite consensus disorder prediction 55 99 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trre10g02509 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02509 - K19871 psat:127123329 83.1889