Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02500 ATGAACAAAATCCGCAATCCGATGAATGAAATGCGCAATTGCGGCATTTGGAAGCGACTATCGAGTCGATACGTTGCTGAAATCAAAAACTCTTTCAAGAAAACATGTGCTTGGTTAGGAACTTTCAAAATCACCAAAGAAGTTGATCATGCTTATGCGAGGTTGCCTTTTGTTCATAAGCACGGGCGGCTTCTTCAGCAGCTTCTTCATATATTCCATAGAATACTGCTGAAGAAGCCGCTCATGCATATGACGAAAAGGCATCCTCGCATAAACATGATCTACTTGTTCGGTAGTTTTGAAAGTTCCTAA 312 0.4103 MNKIRNPMNEMRNCGIWKRLSSRYVAEIKNSFKKTCAWLGTFKITKEVDHAYARLPFVHKHGRLLQQLLHIFHRILLKKPLMHMTKRHPRINMIYLFGSFESS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02500 103 SUPERFAMILY DNA-binding domain 15 57 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02500 Trre-Chr10 31677574 31677885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02500 2 52 AP2-EREBP Transcription Factor Family AT3G15210 45.098 6.16e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02500 K09286 - csv:101221703 48.9062