Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02499 ATGAACAAAATCCGCAATCCGATGAATGAAATGCGCAATTGCGACATTTGGAAGCGACTATCGGGTCGATACGTTGCTGAAATCAAAAACTCTTTCAAGAAAACATGTGCTTGGTTAGGAACTTTCAAAATCACCAAAGAAGTTGATCATGCTTATGCGAGGTTGCCTTTTGGTCATAAGCACGGGCGGCTTCTTCAGCAGCTTCTTCAGATATTCCATAGAATACTGCTGAAGAAGCCGCTCATGCAGATGACGAAAAGGCATCCTCGCATAAACATGATCTACTTGTTCGGTAGTTTTGAAAGTTCCTAA 312 0.4199 MNKIRNPMNEMRNCDIWKRLSGRYVAEIKNSFKKTCAWLGTFKITKEVDHAYARLPFGHKHGRLLQQLLQIFHRILLKKPLMQMTKRHPRINMIYLFGSFESS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02499 103 SUPERFAMILY DNA-binding domain 18 55 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02499 Trre-Chr10 31663722 31664033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02499 2 52 AP2-EREBP Transcription Factor Family AT3G15210 45.098 8.31e-08 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02499 K09286 - csv:101221703 48.521