Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02465 ATGGCAAATGACTTGAAGCTTTTGAGTACACCATCCAGTCCATTTGCATTGAGAGTAAAAATTGCCCTTAACATCAAAGGATTGGATTATGAAAACATTGTAGAAACCATGAATCCCAAAAGTGACTTGCTTCTTCAATCAAACCCAGTTTACAAAAAAATCCCAGTTCTAATTCATGGTGATAAACCCATATGTGAATCTGCAATCATAGTTGAATACATTGATCAAGTTTGGAAAAAAAATGGTACTCCTTCTATCCTTCCTTCAAATGCTTATGATCGCGCCATTGCGCGATTTTGGGTTGCCTACATCGATGACAAGTGGTATAATTCCTCGAAAAATCTTTTGATTGCTCAAAATGATGAGTCAAAGAAAGCATATTTTGAGGAAATGGAAGAAGTTCTTTTGAGGTTAGAAGATGTGCTCAACAAGTACAGTGAAGGAAGGGACTTTTTTGGAGGAGAGAAAATTGGATTTCTTGATATTGGTTTTGGGTGCTATTTAGGTTGGTTAAGGGTCACAGAGAAAATGATAGGAAAAAAGGTACTTGATGAAACAAAGACTCCTGCTTTGGTGAAATGGGCTGAAGCTTTTGCTGCTCATCCTGCTGTGAAGGGAAATCTACCAGAAATTGATAAGCTTTTGGAGTTTGCTAAGGGTTTGGTGCAAAGAATGGTTGCTGCTGCTCCTTCTAAGTGA 699 0.3791 MANDLKLLSTPSSPFALRVKIALNIKGLDYENIVETMNPKSDLLLQSNPVYKKIPVLIHGDKPICESAIIVEYIDQVWKKNGTPSILPSNAYDRAIARFWVAYIDDKWYNSSKNLLIAQNDESKKAYFEEMEEVLLRLEDVLNKYSEGRDFFGGEKIGFLDIGFGCYLGWLRVTEKMIGKKVLDETKTPALVKWAEAFAAHPAVKGNLPEIDKLLEFAKGLVQRMVAAAPSK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02465 232 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Trre10g02465 232 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 216 IPR045073 -
Trre10g02465 232 SUPERFAMILY Thioredoxin-like 4 109 IPR036249 -
Trre10g02465 232 Pfam Glutathione S-transferase, C-terminal domain 96 202 IPR004046 -
Trre10g02465 232 FunFam Glutathione S-transferase GSTU6 1 86 - -
Trre10g02465 232 CDD GST_N_Tau 5 78 - -
Trre10g02465 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Trre10g02465 232 Gene3D - 87 231 - -
Trre10g02465 232 Gene3D Glutaredoxin 1 86 - -
Trre10g02465 232 SUPERFAMILY GST C-terminal domain-like 79 225 IPR036282 -
Trre10g02465 232 CDD GST_C_Tau 91 221 IPR045074 GO:0004364|GO:0006749
Trre10g02465 232 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Trre10g02465 232 FunFam Glutathione S-transferase U9 87 228 - -
Trre10g02465 232 SFLD Glutathione Transferase (cytosolic) 2 227 IPR040079 -
Trre10g02465 232 SFLD Main.3: Omega- and Tau-like 2 227 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02465 Trre-Chr10 30864346 30865444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02465 4 227 Glutathione S-transferase Gene Family AT1G10360 55.357 8.09e-86 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02465 K00799 - gmx:547576 306.605