Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02381 ATGATTGCTGCTTTAAAGGAGACTTGTGCTTATGATAATGAAGAGACTGCAGCACATGCTTATGATCTAGCAGCATTGAAATATTGGGGTCAAGATACCATTATTAATTTTCCGTTATCAAACTGTGAGAAAGAACTGATTGAAATGGAGAGTCAATCAAGGGAAGAGTATATTGGATCCTTAAGAAGGAAAAGCAGTGGTTTTTCTAGGGGAGTTTCTAAATACTTTTTAATAATAGGTAGCTCATGGATTGTTTTTTTGGGAAGAGGCGAGGCTCCTTTTATTTGTATCAGTTGTTGTTTTATTGTGATGTCATTGATATAG 324 0.3519 MIAALKETCAYDNEETAAHAYDLAALKYWGQDTIINFPLSNCEKELIEMESQSREEYIGSLRRKSSGFSRGVSKYFLIIGSSWIVFLGRGEAPFICISCCFIVMSLI 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02381 107 Gene3D AP2/ERF domain 8 40 IPR036955 GO:0003700|GO:0006355
Trre10g02381 107 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10 75 - -
Trre10g02381 107 SUPERFAMILY DNA-binding domain 11 40 IPR016177 GO:0003677
Trre10g02381 107 ProSiteProfiles AP2/ERF domain profile. 10 38 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02381 Trre-Chr10 29142985 29145313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02381 10 75 AP2-EREBP Transcription Factor Family AT3G54320 71.212 2.76e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02381 K09285 - apan:127264853 120.938