Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02366 ATGGCTTTCAACATGATGTTTCTAAGTCTTGTTCTTGTTTTACAAATTTTTCTAATACCAACTTTCTATTGCCAAACCAATTCACCTCAAAACCAAAACATTGAAACTTTGTATCCTATTGAATCTCAAGAACAACCAAAACCAACACAACCTCCTAAGCCACAAGAATCATCACCACCACCATCATCATCACAAGCACCAATAGCATCACCATCATCCACAAAATCTTCTTCAAATAGTAAGATAGTAACTGCTGTAGCTGCAACTGCAACAGGAACATTAATTCTTTCTGCTCTAATTTTCTTCTTTGTTATGAAGTGCTTTAGAGCAAAAAGAAGAAATGTGATAGTAAACAATAGCAATAACAATAACAACACTTCTTCTTTAAATCATAGAAATGTTGTGCCTCAAGTGAAAGTGATTGAGAAAATGGAAGGTAAAATAAAAGGACTTATTGTTGATGAAGATGGTTTAGATGTTGTTTATTGGAGAAAACTTGAAGATCAAAACTCTAATAAGGATTTGCATAAGGGTGTTGTTTTGAATAGTCCTAAAAGCAAACATTATTATGATCATCATGAAGAAAATCAAGGGGAAAATTTAGAGTCTAATAATCAAGAAATTCATTTGCTTAGAGGAAAATCTTCAACCTCACATATGAATATATTTCCACAAGAATCATCATATACAATTATGAAAATTACACCTCCTGCACCTCCTCCTATTATTCCTACTCAGCCATTTTCTTTAAACCTTCTTCCTTCATCACCAAAACGTCTAAAACCACCCTCCACTTCTTCTTTCTCATCAATTCCAAAACATTCAAATCCTTTTGTATTATCAATTCCGAATATGACGAATGATGCAACACCAATAATATCTGATGATGGAAAGAGTCAAAAACCGACGCCACCTCCTCCTCCTCCACCTATACCTGATAGAAAAAGCTCAGCGCCGATGCCGGCGCCTGCTCCTCCTCCTCCACCAATTCTAAATAGAAAGAGTTCTGCAACACCGCCACCACCACCTCCTCCTCCAGTAACTACTGGAAAGAGTCCTGCACCACCACCCCCTCCGAAGATAGGTGGATTGAAATTGAAGTCATCATCAAAACCACCACCTATCCCTATTGAAACATCTTCAAGTGAGGTAAAAATGAAACCATTGCATTGGGATAAGGTGAATACTAATCTTGATCACTCTATGGTATGGGACAAAATCGACCGCGGTTCATTCAGGGTTGATGATGATCTTATGGAAGCCCTCTTCGGGATTGTCGCAACCAAAACAAATGGTAACACTTCAAAAGGAAAGGAATCAACAAGTCCAAACAGGGATGCATCGACAAATGCTTTCATTCTTGACCCTAGAAAATCACAAAATACTGCTATAGTTTTGAAATCTCTTGCAATCTCACGAAAAGAAATCATCGAAGCACTCATTGATGGTCAAGGCCTCAATGCAGATACAATTGAAAAGCTTTCAAGAATAGCTCCAACAGAAGAAGAACAATCCCAAATACTTGAATATGAAGGAGACACAACAAAACTTGCAGCAGCTGAATCTTTCTTGTACCACATCCTCAAAGCTGTTCCTTCGGCATTTAAGCGCTTGAATGCAATTCTATTCAGATTGAATTATGACTCGGAGATCGTAGAAATCAAGGAGTTTCTACAGACCCTTGAGCTTGCGTGTAAGGAGCTTCGAAACCAAGGAGTTTTTGTAAAACTTCTTGAAGCAGTTCTTAAGGCCGGAAACCGTATGAACGCAGGTACTAATAGAGGTAATGCTCAAGCTTTCAACTTAGTTTCTCTAAGGAAACTCTCTGATGTTAAGAGTGTTGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTTGTCCGTTCCGAAGGAAAACGCGCGGTTCTTAACCGCAATCACAGTTTGAGTCGTAGTTTCAGTAGGAGCAATAGCAGCAGCAGCATTGGAGACTCTAACAATTCTGCTACTTCAAAGGAACAAAAGCAAAGAGAATATACAACACTAGGATTACCAATTGTAGGAGGGGTCAGTGCAGAGTTTTCCAATGTAAAGAAAGTTGCTCAAACAGATTACAATAGTTTTGTTGGTTCTATCTCAGCACTCTTGGCAAGGATAGTTGAAATTCGACAACTTGTTTCGCAGTGTGGAAATAATGATAAAGAAGGAAAGTTTGTCAGAGAGATGAATCATTTTCTTGAAAATGCTGAGAAGGAATTGCAATTGGTGAGTGAAGAACAAACAAGGGTAATGCAGCTTGTTAAGAGAACAACAGATTATTATCAAGGTGGAGCTTCAAAAGACAGTGCAGGAGAACAGGCTCTTTATCTATTTGTTATAGTCAAGGATTTTCTTGGAATGGTTGATCAAGCCTGCATAGACATCACTCGAAACATGCAGAAAAAGAAGACACCTAAGGGTGGACGTCAGCAGAGGGACAAGAAGAAAGGACTTTTCGAGGTGTCAAACCTGCCGGAACATAGCAGGTCAAACAATTCTAGGATTGGTACAACTGTTTCAACTTTTTCCTATGTCGCCAATTATCCAAAGGAACTGAAGTTCTGTCATGACAGGACCAATTTGTGTCTGGCAAATTAA 2622 0.386 MAFNMMFLSLVLVLQIFLIPTFYCQTNSPQNQNIETLYPIESQEQPKPTQPPKPQESSPPPSSSQAPIASPSSTKSSSNSKIVTAVAATATGTLILSALIFFFVMKCFRAKRRNVIVNNSNNNNNTSSLNHRNVVPQVKVIEKMEGKIKGLIVDEDGLDVVYWRKLEDQNSNKDLHKGVVLNSPKSKHYYDHHEENQGENLESNNQEIHLLRGKSSTSHMNIFPQESSYTIMKITPPAPPPIIPTQPFSLNLLPSSPKRLKPPSTSSFSSIPKHSNPFVLSIPNMTNDATPIISDDGKSQKPTPPPPPPPIPDRKSSAPMPAPAPPPPPILNRKSSATPPPPPPPPVTTGKSPAPPPPPKIGGLKLKSSSKPPPIPIETSSSEVKMKPLHWDKVNTNLDHSMVWDKIDRGSFRVDDDLMEALFGIVATKTNGNTSKGKESTSPNRDASTNAFILDPRKSQNTAIVLKSLAISRKEIIEALIDGQGLNADTIEKLSRIAPTEEEQSQILEYEGDTTKLAAAESFLYHILKAVPSAFKRLNAILFRLNYDSEIVEIKEFLQTLELACKELRNQGVFVKLLEAVLKAGNRMNAGTNRGNAQAFNLVSLRKLSDVKSVDGKTTLLHFVVEEVVRSEGKRAVLNRNHSLSRSFSRSNSSSSIGDSNNSATSKEQKQREYTTLGLPIVGGVSAEFSNVKKVAQTDYNSFVGSISALLARIVEIRQLVSQCGNNDKEGKFVREMNHFLENAEKELQLVSEEQTRVMQLVKRTTDYYQGGASKDSAGEQALYLFVIVKDFLGMVDQACIDITRNMQKKKTPKGGRQQRDKKKGLFEVSNLPEHSRSNNSRIGTTVSTFSYVANYPKELKFCHDRTNLCLAN 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02366 873 MobiDBLite consensus disorder prediction 237 383 - -
Trre10g02366 873 ProSiteProfiles Formin homology-2 (FH2) domain profile. 376 822 IPR015425 -
Trre10g02366 873 MobiDBLite consensus disorder prediction 45 66 - -
Trre10g02366 873 MobiDBLite consensus disorder prediction 646 671 - -
Trre10g02366 873 MobiDBLite consensus disorder prediction 808 840 - -
Trre10g02366 873 Gene3D Formin, FH2 domain 396 826 IPR042201 -
Trre10g02366 873 Coils Coil 734 761 - -
Trre10g02366 873 SUPERFAMILY Formin homology 2 domain (FH2 domain) 389 811 - -
Trre10g02366 873 SMART it6_source 376 811 IPR015425 -
Trre10g02366 873 MobiDBLite consensus disorder prediction 300 362 - -
Trre10g02366 873 MobiDBLite consensus disorder prediction 42 77 - -
Trre10g02366 873 Pfam Formin Homology 2 Domain 381 796 IPR015425 -
Trre10g02366 873 Coils Coil 551 571 - -
Trre10g02366 873 MobiDBLite consensus disorder prediction 430 449 - -
Trre10g02366 873 PANTHER FORMIN-RELATED 14 813 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trre10g02366 873 MobiDBLite consensus disorder prediction 248 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02366 Trre-Chr10 28611991 28615000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02366 8 812 FH2 protein (formin) Gene Family AT1G70140 43.727 0.0 558