Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02322 ATGCCAACCCTTGTTCAATTCTTGATATCAGTTTCGACACTGTTGCTTTTTGTGCAAGTTTCATCCCAAGTTAACCAGTTCTTGTATGCAGGATTCAAGGATATTGGTCCCAACAATATAACCTTGGAAGGATTTGCAAAGATAGAGAAAAATGGGATAATAAGATTAACAAATCATACAAACAATATAACAGGTCATGCTTTTTATCCAATACCTTTTCAACTAAAGAACTCGACAACTGGTAAAGCTTTCTCTTTTTCTTCATCTTTTGTTCTTGCTGTTGTCCCTCAGTATCCTAACATAGGTGGTCATGGCATGGCCTTCACAATAGCAACTACTAAGGATCTTAAAGGTTTACCTATTCAATATCTTGGTCTATTCAATTCAAGTAATGTTGGTCATTTCTCTAACCATCTTTTTGCTGTTGAGTTTGACACTGTCCAAGACTTTGGATTTGATGATATCAATGATAACCATATTGGAATCGACATCAATGGTTTGAAATCTAATGCATCTGTAATTGCTGGCTATTACACTGACAATGATTCAACCAAACAATATTTTAATATCAAAAGTGGTAAACCAATTCTAGCTTGGGTTGATTATGATTCTTCATTGAATCTTGTTAGTGTTGCACTTTCTTCAACTTTAACCAAACCCAAAAAACCAATTTTGTCCTTTCATGTGGATTTGTCACATGTTCTTCATGATACTATGTATGTTGGATTCTCTGCATCAACTGGTTTGCAGCTTGCTAGTTCTCATTACATCTTGGGTTGGAGTTTTAGAATCAATGGACCAGCACCATCACTTGATTTGTCTTCACTTCCACAACTTACACAACCAAAGAAGAAAAACACTTCTTTGATAACCGGTGTTTCAGTCACGGTTTTGGTTGTTGTATTGTGTTCTATAGCAATTGGTATTTACATTTTCAGAAAAATCAAGAATGCTGATGTAATAGAACCATGGGAGCTTGAAGTTGGGCCACATAGATACTCCTATCAAGAGCTAAACAAAGCTACAAAAGGTTTCAAAGAGAAAGAGTTACTTGGGCAGGGTGGTTTTGGCAGAGTTTACAAAGGGACATTGCCAAATACAGATATTCAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGGCTAAGAGAATTTGTCTCCGAAATCGCCAGCATAGGTCGGCTTCGCCATAGGAATTTGGTTCAGTTATTCGGATGGTGTCGCCGCAAAGGCGACCTCTTACTAGTGTTATGTGAACATGGTGATAATCCAGGTACCACAAGAGTGGTAGGAACCTTAGGCTATTTGGCACCAGAATTACTTAGAACAGGAAAAGCATCTACAAGTTCTGATGTTTTTGCATTTGGTGCATTTCTTCTTGAGGTTGCTTGTGGGAGAAGGCCTATTGAGCCTAAGGCATTACAAGAAGAGTTAGTGTTAGTGGATTGGGTGTGGGAAAGGTACAAAGAAGGAAGAATACTTGAAGTAGTGGATCCTAAATTGAATGGAAATTTAGATGAAAGTGAGGTAGTGATGGTGTTGAAATTGGGATTGATATGTTCAAATGATGTTCCTATTATAAGGCCTAGCATGAGACATGTAATGAGGATTTTGGATGGAGAAGTTGAATTGCCTAATGACTTGAGAAAGCCAGGAGTTATTGATCCACAAGAGGGGTTCGATGAATTTTTGAACTCGCTTACATATTCATCAATTGATATCTTGAGTTCAAGCTCTTATCTTGAAAATAGATACACTAATACTTGTAATACCTCTTTTGAAAATTCACCTCAATCACTTCTCAATCCTAGAGAGTAA 1824 0.3717 MPTLVQFLISVSTLLLFVQVSSQVNQFLYAGFKDIGPNNITLEGFAKIEKNGIIRLTNHTNNITGHAFYPIPFQLKNSTTGKAFSFSSSFVLAVVPQYPNIGGHGMAFTIATTKDLKGLPIQYLGLFNSSNVGHFSNHLFAVEFDTVQDFGFDDINDNHIGIDINGLKSNASVIAGYYTDNDSTKQYFNIKSGKPILAWVDYDSSLNLVSVALSSTLTKPKKPILSFHVDLSHVLHDTMYVGFSASTGLQLASSHYILGWSFRINGPAPSLDLSSLPQLTQPKKKNTSLITGVSVTVLVVVLCSIAIGIYIFRKIKNADVIEPWELEVGPHRYSYQELNKATKGFKEKELLGQGGFGRVYKGTLPNTDIQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLFGWCRRKGDLLLVLCEHGDNPGTTRVVGTLGYLAPELLRTGKASTSSDVFAFGAFLLEVACGRRPIEPKALQEELVLVDWVWERYKEGRILEVVDPKLNGNLDESEVVMVLKLGLICSNDVPIIRPSMRHVMRILDGEVELPNDLRKPGVIDPQEGFDEFLNSLTYSSIDILSSSSYLENRYTNTCNTSFENSPQSLLNPRE 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02322 607 PANTHER - 43 418 - -
Trre10g02322 607 Pfam Protein tyrosine and serine/threonine kinase 435 475 IPR001245 GO:0004672|GO:0006468
Trre10g02322 607 Pfam Protein tyrosine and serine/threonine kinase 347 422 IPR001245 GO:0004672|GO:0006468
Trre10g02322 607 CDD lectin_legume_LecRK_Arcelin_ConA 26 266 IPR001220 GO:0030246
Trre10g02322 607 FunFam L-type lectin-domain containing receptor kinase S.4 23 270 - -
Trre10g02322 607 FunFam Lectin-domain containing receptor kinase A4.3 330 420 - -
Trre10g02322 607 SUPERFAMILY Protein kinase-like (PK-like) 327 557 IPR011009 -
Trre10g02322 607 Gene3D Transferase(Phosphotransferase) domain 1 419 552 - -
Trre10g02322 607 Gene3D - 23 270 - -
Trre10g02322 607 Pfam Legume lectin domain 26 276 IPR001220 GO:0030246
Trre10g02322 607 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 283 IPR013320 -
Trre10g02322 607 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Trre10g02322 607 ProSiteProfiles Protein kinase domain profile. 345 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g02322 607 Gene3D Phosphorylase Kinase; domain 1 330 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02322 Trre-Chr10 27921196 27923244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02322 411 606 Receptor kinase-like Gene Family AT3G55550 49.749 3.26e-52 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre10g02322 Lectin_legB 1.9e-72 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02322 - - gmx:100784346 578.17