Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02321 ATGCCAACCCTTGTTCAATTCTTGATATCAGTTTCGACACTGTTGCTTTTTGTGCAAGTTTCATCCCAAGTTAACCAGTTCTTGTATGCAGGATTCAAGGATATTGGTCCCAACAATATAACCTTGGAAGGATTTGCAAAGATAGAGAAAAATGGGATAATAAGATTAACAAATCATACAAACAATATAACAGGTCATGCTTTTTATCCAATACCTTTTCAACTAAAGAACTCGACAACTGGTAAAGCTTTCTCTTTTTCTTCATCTTTTGTTCTTGCTGTTGTCCCTCAGTATCCTAACATAGGTGGTCATGGCATGGCCTTCACAATAGCAACTACTAAGGATCTTAAAGGTTTACCTATTCAATATCTTGGTCTATTCAATTCAAGTAATGTTGGTCATTTCTCTAACCATCTTTTTGCTGTTGAGTTTGACACTGTCCAAGACTTTGGATTTGATGATATCAATGATAACCATATTGGAATCGACATCAATGGTTTGAAATCTAATGCATCTGTAATTGCTGGCTATTACACTGACAATGATTCAACCAAACAATATTTTAATATCAAAAGTGGTAAACCAATTCTAGCTTGGGTTGATTATGATTCTTCATTGAATCTTGTTAGTGTTGCACTTTCTTCAACTTTAACCAAACCCAAAAAACCAATTTTGTCCTTTCATGTGGATTTGTCACATGTTCTTCATGATACTATGTATGTTGGATTCTCTGCATCAACTGGTTTGCAGCTTGCTAGTTCTCATTACATCTTGGGTTGGAGTTTTAGAATCAATGGACCAGCACCATCACTTGATTTGTCTTCACTTCCACAACTTACACAACCAAAGAAGAAAAACACTTCTTTGATAACCGGTGTTTCAGTCACGGTTTTGGTTGTTGTATTGTGTTCTATAGCAATTGGTATTTACATTTTCAGAAAAATCAAGAATGCTGATGTAATAGAACCATGGGAGCTTGAAGTTGGGCCACATAGATACTCCTATCAAGAGCTAAACAAAGCTACAAAAGGTTTCAAAGAGAAAGAGTTACTTGGGCAGGGTGGTTTTGGCAGAGTTTACAAAGGGACATTGCCAAATACAGATATTCAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGGCTAAGAGAATTTGTCTCCGAAATCGCCAGCATAGGTCGGCTTCGCCATAGGAATTTGGTTCAGTTATTCGGATGGTGTCGCCGCAAAGGCGACCTCTTACTAGTGTATGACTTCATGGCTAATGGAAGCTTAGATAAGTACTTATTTGAAAAGATAGAAATTGTCTTAACTTGGGAACAAAGGTTTAAGATAATAAAGGGTGTTGCTTCAGCTCTTTTGTATCTACATGAAGGCTATGAGCAAGTGGTGATACATAGAGATGTTAAGGCTAGCAATGTTCTTTTAGATTTTGAACTTAATGGAAGATTAGGTGATTTTGGTTTGGCAAGGTTATGTGAACATGGTGATAATCCAGGTACCACAAGAGTGGTAGGAACCTTAGGCTATTTGGCACCAGAATTACTTAGAACAGGAAAAGCATCTACAAGTTCTGATGTTTTTGCATTTGGTGCATTTCTTCTTGAGGTTGCTTGTGGGAGAAGGCCTATTGAGCCTAAGGCATTACAAGAAGAGTTAGTGTTAGTGGATTGGGTGTGGGAAAGGTACAAAGAAGGAAGAATACTTGAAGTAGTGGATCCTAAATTGAATGGAAATTTAGATGAAAGTGAGGTAGTGATGGTGTTGAAATTGGGATTGATATGTTCAAATGATGTTCCTATTATAAGGCCTAGCATGAGACATGTAATGAGGATTTTGGATGGAGAAGTTGAATTGCCTAATGACTTGAGAAAGCCAGGAGTTATTGATCCACAAGAGGGGTTCGATGAATTTTTGAACTCGCTTACATATTCATCAATTGATATCTTGAGTTCAAGCTCTTATCTTGAAAATAGATACACTAATACTTGTAATACCTCTTTTGAAAATTCACCTCAATCACTTCTCAATCCTAGAGAGTAA 2049 0.3685 MPTLVQFLISVSTLLLFVQVSSQVNQFLYAGFKDIGPNNITLEGFAKIEKNGIIRLTNHTNNITGHAFYPIPFQLKNSTTGKAFSFSSSFVLAVVPQYPNIGGHGMAFTIATTKDLKGLPIQYLGLFNSSNVGHFSNHLFAVEFDTVQDFGFDDINDNHIGIDINGLKSNASVIAGYYTDNDSTKQYFNIKSGKPILAWVDYDSSLNLVSVALSSTLTKPKKPILSFHVDLSHVLHDTMYVGFSASTGLQLASSHYILGWSFRINGPAPSLDLSSLPQLTQPKKKNTSLITGVSVTVLVVVLCSIAIGIYIFRKIKNADVIEPWELEVGPHRYSYQELNKATKGFKEKELLGQGGFGRVYKGTLPNTDIQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLFGWCRRKGDLLLVYDFMANGSLDKYLFEKIEIVLTWEQRFKIIKGVASALLYLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLCEHGDNPGTTRVVGTLGYLAPELLRTGKASTSSDVFAFGAFLLEVACGRRPIEPKALQEELVLVDWVWERYKEGRILEVVDPKLNGNLDESEVVMVLKLGLICSNDVPIIRPSMRHVMRILDGEVELPNDLRKPGVIDPQEGFDEFLNSLTYSSIDILSSSSYLENRYTNTCNTSFENSPQSLLNPRE 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02321 682 PANTHER - 43 622 - -
Trre10g02321 682 CDD lectin_legume_LecRK_Arcelin_ConA 26 266 IPR001220 GO:0030246
Trre10g02321 682 CDD STKc_IRAK 351 617 - -
Trre10g02321 682 FunFam L-type lectin-domain containing receptor kinase S.4 422 627 - -
Trre10g02321 682 ProSiteProfiles Protein kinase domain profile. 345 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g02321 682 SMART serkin_6 345 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g02321 682 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Trre10g02321 682 Gene3D Transferase(Phosphotransferase) domain 1 422 629 - -
Trre10g02321 682 SUPERFAMILY Protein kinase-like (PK-like) 327 632 IPR011009 -
Trre10g02321 682 FunFam L-type lectin-domain containing receptor kinase S.4 23 270 - -
Trre10g02321 682 Pfam Protein kinase domain 345 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g02321 682 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
Trre10g02321 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 283 IPR013320 -
Trre10g02321 682 Pfam Legume lectin domain 26 276 IPR001220 GO:0030246
Trre10g02321 682 FunFam Lectin-domain containing receptor kinase A4.3 330 421 - -
Trre10g02321 682 Gene3D - 23 270 - -
Trre10g02321 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02321 Trre-Chr10 27921196 27923244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02321 20 681 Receptor kinase-like Gene Family AT3G55550 57.079 0.0 745
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre10g02321 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02321 - - gmx:100784346 975.311