Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02256 ATGGAAGAACATCTTACTCCATTAGCTGTTACTCATCTTCTTCAACACACTCTAAGAAGTTTATGCATCCATGAAAATTCTCAATGGGTTTATGCTGTTTTTTGGAGGATCTTGCCTAGGAACTACCCTCCACCAAAATGGGAAGGACAAGGGGCATATGATAGATCAAGAGGAAACAGAAGGAATTGGATATTAGTTTGGGAAGATGGATTCTGCAATTTTGCAGCATCAGCAGCAGCACCTGAAATAAACTCTGGTGGTAGTGATTGTCCTAACTCATCATCAGTTTATGGTAACTGTGAATTAATTCAACCTTACCAAGGTCTTCAACCTGAACTTTTCTTCAAGATGTCACATGAGATCTATAACTATGGTGAAGGATTGATTGGAAAAGTAGCTGCAGATCACAGTCACAAGTGGATATACAAAGAACCTAATGATCAAGAAATTAACTTCTTATCAGCATGGCATAATTCAGCTGACTCACACCCTAGGACATGGGAAGCTCAGTTCTTGTCTGGTATAAAGACTATAGCCCTCATTGCTGTTAGAGAAGGTGTTGTTCAATTAGGAGCTGTTCACAAGGTGATTGAAGACTTAAGCTATGTGGTTCTATTAAGAAAAAAGTTCAGCTACATTGAAAGCATACCAGGAGTACTTCTACCACACCCTTCATCATCAGCATACCCTTACAAACTAGAACCCTATGGTAATATTCCACCAGAACAATGGCATAATTACCAAGGAATTAGTTATGCACCACAACAACAAAGTGATCAATTATATGATCATTTCAACAACATGCCAATGAAAGTAACACCATCAATGAGTAGTCTTGAAGCATTACTCTCAAAGTTACCTTCAGTTGTTCCACCACAACAAGAAGAACAACAAAGAGCATTGGAATTTATGGGAGGAATGCAAAAAGTTGCAAAAGAAGAGTTAGATGAAGAACAAGAAGAGGTATATAGACCTGAACAACTTGATGTTGGTGAGAGTAGCACTAGTTCCATGTCAAGGTACCAACATCATCATCATTTCCATCAAGACCATCATCATCATCATCTTGGGAATGGATCAAACAATAATAATAATGGATTTTGA 1104 0.3804 MEEHLTPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAAPEINSGGSDCPNSSSVYGNCELIQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFLSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKLEPYGNIPPEQWHNYQGISYAPQQQSDQLYDHFNNMPMKVTPSMSSLEALLSKLPSVVPPQQEEQQRALEFMGGMQKVAKEELDEEQEEVYRPEQLDVGESSTSSMSRYQHHHHFHQDHHHHHLGNGSNNNNNGF 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02256 367 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 346 - -
Trre10g02256 367 MobiDBLite consensus disorder prediction 312 367 - -
Trre10g02256 367 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 210 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02256 Trre-Chr10 26509219 26511288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02256 15 210 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.964 1.51e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02256 - - vun:114173114 553.518