Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02204 ATGGAGAATCAGGGACTGGAATTTCTTCAATTTGCTTTCCGCTGGTTCAACTGTCTTCTAATCCGCGAGATACCCTTCCAACTTGTCACACGCCTTTGGGATACATATCTTGCTGAAGGAGATGCCTTACCAGACTTCCTTGTGTATATATTTGCCAGTTTTCTTCTTACGGTGAGCATTGGGAAACAGTGGAACGAGTTTCTTGATTATAATGAAACCATTGGCTTTATATTTCATGATGATGCGAAGAAGCTTGACAGAGCTGCTAAAAACAAATATGTTGTATGA 288 0.4028 MENQGLEFLQFAFRWFNCLLIREIPFQLVTRLWDTYLAEGDALPDFLVYIFASFLLTVSIGKQWNEFLDYNETIGFIFHDDAKKLDRAAKNKYVV 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02204 95 Pfam Rab-GTPase-TBC domain 1 55 IPR000195 -
Trre10g02204 95 Gene3D - 1 93 - -
Trre10g02204 95 ProSiteProfiles TBC/rab GAP domain profile. 1 40 IPR000195 -
Trre10g02204 95 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 1 58 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02204 Trre-Chr10 25840389 25841241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02204 58 95 Eukaryotic Initiation Factors Gene Family AT4G18040 76.316 7.70e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02204 K20360 - tcc:18602412 122.094