Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02151 ATGGCTAATGAAACTAAGTCAAATGGAACGTCTTTTTCTTTGAATATAGAAAAAAAAGATTCTGAAAAAGCTTCTGCTCCGTCTCCATCTTCATCTTTATTACAATCTGAGGACTCGGTTCCTCCAGAAAAAGCACCATCAAATTCTCCACCACCGTCGCCAACAGCATCGCCACCACCTTCACCGCCGCCGCAAGCGCAATCTCCACCGCCACAATCTTCGCCACCTCCATCAAAAGTTTCGCCTCCACCTTCTCAATCATCACCGCCTACAACACCAACATTGTCTCCGCCGCCTCCATCATTTTCACCACCACCACCAGTCGGCAATAATTCTCCCCCTCCTTCACAATCAAATTCCCCTCCTCACGTTCCGTCCTTACCTCCGCCTTCTTCCAAAACTAGTCCTTCCCCGCCACAAAATCGTCCTTCACCGTCACAATCATCATCAGATTCCCCAAGCTCCCATTCAAAACCAAGCTCTCCTCCTTCCAAAAGTAACTCTCTATCCAAACAGCACTCCTCCAATGATAATACAGGACAATACATTGGTTTTGCTGTTGCAGCAGTTTTTGTTCTCGCATTTATTGCATTCATTCTTTTTTACATATTAAAAAGAAAAGACAGACGAGGGAATTTCTATGGTATGCCGCCACCCCATATGAAACCTCAAATGAATGGAGATGTGCATTATTATGTAGAGTCGCCGGGTTTTGGATATAGTCATAGGAACAATGCAGGTGCAATGCAACATACAAGAACTCCTTCAGACAAAACACAACAACAAATGAGTGGTGGTCAAATGGTTTTTAGTTACGACAATGTTGCTGAAATTACTAACGGGTTTTCAAGTGAAAACGTGATAGGAGAAGGAGGTTTTGGGTGTGTTTATAAGGCTTCAATGCCCGATGGTAGAATTGGAGCAGTTAAGTTGTTGAAGGCTGGTAGTGGTCAAGGAGAAAGAGAGTTTAGAGCAGAGGTTGATACTATTAGTCGTGTTCATCATCGACATTTGGTATCTTTGATTGGTTATTGTATATCTGAGCAACAAAGAGTTCTCATTTATGAGTTTGTTCCTAATGGAAATCTTGATCAACATTTGCATGGAAGTGCATGGAATGTTTTGGATTGGCCCAAGAGAATGAAGATAGCAATTGGTGCTGCAAGGGGCCTTGCATATCTACATGAAGGCTGCAACCCAAAGATTATTCACAGAGATATTAAGTCATCGAATATACTTTTGGACAATGCTTATGAGGCACAGGTTGCAGATTTTGGACTTGCCAAATTAACCGATGCTGCTAATACTCATGTATCAACTAGGGTGATGGGTACTTTTGGCTACATGGCTCCAGAGTATGCAACGAGTGGAAAACTAACGGATAGATCAGATGTTTTCTCATTTGGAGTTGTTCTTCTTGAGCTTATAACTGGAAGGAAACCTGTTGATCCAACACAGCCTGTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCGTTCGTGCAATTGAAACGGGTGACTTTAGTGAACTAGTTGACCCGAGACTTCAACGACAATATAGTGACAGTGAAATGGTTAGAATGATTGAAGCAGCTGCAGCATGTGTTCGGCATTCTGCCCCAAAACGACCGCGGATGGTTCAGGTTGCAAGAGCCTTGGACAGTGGAGATCAACTATATGATCTATCGAACGGGGTGAAGTATGGTCAGAGCACAATTTATGATTCTGATAAGTATCATGAAGACCTAATGAGATTCAAAAGGATGGCTAATGGAAGTTTTGGTGAGTCTGAATTTGATATGTACAGCACAGAATACAGTTCAAGATCTGCATTTGTGCCACCACACACTTCAAGTGGTGATTCACAAATTAGACCTTTCCAAAACTAA 1896 0.4272 MANETKSNGTSFSLNIEKKDSEKASAPSPSSSLLQSEDSVPPEKAPSNSPPPSPTASPPPSPPPQAQSPPPQSSPPPSKVSPPPSQSSPPTTPTLSPPPPSFSPPPPVGNNSPPPSQSNSPPHVPSLPPPSSKTSPSPPQNRPSPSQSSSDSPSSHSKPSSPPSKSNSLSKQHSSNDNTGQYIGFAVAAVFVLAFIAFILFYILKRKDRRGNFYGMPPPHMKPQMNGDVHYYVESPGFGYSHRNNAGAMQHTRTPSDKTQQQMSGGQMVFSYDNVAEITNGFSSENVIGEGGFGCVYKASMPDGRIGAVKLLKAGSGQGEREFRAEVDTISRVHHRHLVSLIGYCISEQQRVLIYEFVPNGNLDQHLHGSAWNVLDWPKRMKIAIGAARGLAYLHEGCNPKIIHRDIKSSNILLDNAYEAQVADFGLAKLTDAANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPTQPVGDESLVEWARPLLVRAIETGDFSELVDPRLQRQYSDSEMVRMIEAAAACVRHSAPKRPRMVQVARALDSGDQLYDLSNGVKYGQSTIYDSDKYHEDLMRFKRMANGSFGESEFDMYSTEYSSRSAFVPPHTSSGDSQIRPFQN 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02151 631 MobiDBLite consensus disorder prediction 1 15 - -
Trre10g02151 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Trre10g02151 631 MobiDBLite consensus disorder prediction 25 43 - -
Trre10g02151 631 SMART serkin_6 282 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g02151 631 MobiDBLite consensus disorder prediction 44 143 - -
Trre10g02151 631 FunFam Proline-rich receptor-like protein kinase PERK8 254 357 - -
Trre10g02151 631 MobiDBLite consensus disorder prediction 144 175 - -
Trre10g02151 631 Pfam Protein tyrosine and serine/threonine kinase 285 554 IPR001245 GO:0004672|GO:0006468
Trre10g02151 631 Gene3D Transferase(Phosphotransferase) domain 1 358 569 - -
Trre10g02151 631 PRINTS Proline rich extensin signature 93 114 - -
Trre10g02151 631 PRINTS Proline rich extensin signature 81 93 - -
Trre10g02151 631 PRINTS Proline rich extensin signature 40 52 - -
Trre10g02151 631 PRINTS Proline rich extensin signature 55 71 - -
Trre10g02151 631 MobiDBLite consensus disorder prediction 1 175 - -
Trre10g02151 631 SUPERFAMILY Protein kinase-like (PK-like) 258 555 IPR011009 -
Trre10g02151 631 Gene3D Phosphorylase Kinase; domain 1 242 357 - -
Trre10g02151 631 MobiDBLite consensus disorder prediction 612 631 - -
Trre10g02151 631 CDD STKc_IRAK 288 556 - -
Trre10g02151 631 FunFam proline-rich receptor-like protein kinase PERK8 358 570 - -
Trre10g02151 631 ProSiteProfiles Protein kinase domain profile. 282 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g02151 631 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 190 595 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02151 Trre-Chr10 24985007 24988667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02151 184 609 Trihelix Transcription Factor Family AT1G70460 58.969 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Trre10g02151 PK_Tyr_Ser-Thr 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02151 - - tpra:123908299 753.821