Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02107 ATGAAGAAAGCACTCCCTCTCATCTTTTCACAATGCCTCAAACTTCTCATCAAGTTTGTATTACTATCAGAAACTATAATGGCAGAACCAAGAACCAAGACAGTTAGATTAACATGTGGCCATCAACTAGAGCACAACACAAATATTTTTGTTCCAAATTTTGTTGCAACTATGGAGAAGATTAGCGAGCAGATACGTAGTACTGGATTCGGCACAGCAGTTACAGGGACAGGGCCTGATGGTAACTATGGCCTAGCACAATGCTATGGAGATCTTTCATTACTCGACTGTGTGTTATGTTATGCCGAGGCGCGCACGGTTCTTCCTCAGTGCTACCCTTATAATTCCGGTCGGATTTACCTTGACGGTTGTTTCATGAGGTCTGGGAATTATAGTTTCTTTAATGAGTATAAAGGACCAGAAGATAGTGTTGTATGTGCAAACACAACGATGAAGAACTCAGGTTTTCAAGCAGCAGCAAAACAAGCAGTGTTGAGAGCAGTTCAAGATGCGCCGAACAATAAAGGATATGCTAGGGGGAAAGTTTCTGTATCAGGAACAGCAAATGAATCTGCTTATGTTCTGGCTGATTGTTGGAGGACTTTGGATTCTAGTTCTTGCAAAGCATGTCTTGAGCATGCATCTTCTTCTATAGTAGGATGCTTGCCCTTCTCAGAAGGACGAGCGCTCAACACCGGATGCTTCATGAGGTACTCAGACACTGATTTTCTTAACAAGGAAGTAGAAAATGAGAGTTCAAGAGGTAATGTGGTAGTGATAGTTGTTGCACTAGTCAGTTCGGTGGTCGTTGCAGTTGTTGGAGTGACCATTGGAGCATATATCTGGAAACAAAGACACATTCAAAAGAAAAGAAGAGGATCAAATGATGCAAAAAAGTTAGCAAAGACTCTTGAACAAAAAAGCTTGAACTTCAAGTACTCTACATTGGAAAAAGCTACTGAATCTTTTAATGACAATAACAAGTTAGGCCATGGAGGATTTGGCACGGTTTATAGAGGAGTTCTACCTGATGGAAGAGAGATTGCTATCAAAAGATTATATTTCAACAACAGACATAGAGCAGCAGATTTCTACAACGAAGTCAACATAATTAGTGGCGTTGAACACAAGAATCTAGTTAGACTATTAGGATGCAGTTGTTCAGGACCTGAAAGCCTGCTTGTTTACGAATATATGCACAACAGAAGTCTCGATCGCTTCATTTTTGATAAAAACAAGGGCAGAGAACTAAATTGGGAAAAGAGATATGAAATAATTATTGGGACAGCTGAAGGATTAGTTTACCTTCACGAGAACTCCGAAATCAGGATCATTAATAGAGATATAAAAGCCAGCAATATTCTGTTGGATTCAAAGCTTCGAGCTAAAATTGCAGATTTTGGTTTGGCCAGATCCTTTCAAGAAGACAAGAGCCACATAAGTACAGCTATTGCAGGAACTTTGGGGTATATGGCTCCAGAATATCTAGCTCATGGTCAGTTAACAGAAAAAGCAGACGTATATAGTTTTGGAATATTACTGCTAGAGATAGTTACTGGAAGACAGAACAACAGGAGCAAAGCATCAGAATATTCAGACAGCTTAGTTATAGTGGCATGGAAGCATTTTCAGTCGGGGACTGCCGAACAGTTATTTGATCCAAATCTAGAATTGTACAACAGCTTCAATAGTGATGTTAAGAATGAGATTTTAAGAGTGTTTCATATAGGACTTCTATGCATCCAAGAGGTCGCTTCATTACGACCAACTATGTCAAAGACGTTACAGATGCTAACCGAAAATGAGGTGTGTCTTGTTGCTCCATCTAATCCACCCTTCTTAGATGAGAGTACCATGGAACTCCATGAGACAAGTGGTGACCCATTTTACCTCCCCAAAATAGCTGATTCAGTTGCTACTATGTCCCATAGCTCTTTCCATCCCAGGTGA 1950 0.4015 MKKALPLIFSQCLKLLIKFVLLSETIMAEPRTKTVRLTCGHQLEHNTNIFVPNFVATMEKISEQIRSTGFGTAVTGTGPDGNYGLAQCYGDLSLLDCVLCYAEARTVLPQCYPYNSGRIYLDGCFMRSGNYSFFNEYKGPEDSVVCANTTMKNSGFQAAAKQAVLRAVQDAPNNKGYARGKVSVSGTANESAYVLADCWRTLDSSSCKACLEHASSSIVGCLPFSEGRALNTGCFMRYSDTDFLNKEVENESSRGNVVVIVVALVSSVVVAVVGVTIGAYIWKQRHIQKKRRGSNDAKKLAKTLEQKSLNFKYSTLEKATESFNDNNKLGHGGFGTVYRGVLPDGREIAIKRLYFNNRHRAADFYNEVNIISGVEHKNLVRLLGCSCSGPESLLVYEYMHNRSLDRFIFDKNKGRELNWEKRYEIIIGTAEGLVYLHENSEIRIINRDIKASNILLDSKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGILLLEIVTGRQNNRSKASEYSDSLVIVAWKHFQSGTAEQLFDPNLELYNSFNSDVKNEILRVFHIGLLCIQEVASLRPTMSKTLQMLTENEVCLVAPSNPPFLDESTMELHETSGDPFYLPKIADSVATMSHSSFHPR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02107 649 FunFam Cysteine-rich receptor-like protein kinase 2 32 133 - -
Trre10g02107 649 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Trre10g02107 649 FunFam Cysteine-rich receptor-like protein kinase 3 142 243 - -
Trre10g02107 649 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Trre10g02107 649 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 83 622 - -
Trre10g02107 649 Gene3D Transferase(Phosphotransferase) domain 1 399 605 - -
Trre10g02107 649 FunFam Cysteine-rich receptor-like protein kinase 2 399 606 - -
Trre10g02107 649 ProSiteProfiles Protein kinase domain profile. 323 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g02107 649 SMART serkin_6 323 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g02107 649 Gene3D - 32 133 IPR038408 -
Trre10g02107 649 Gene3D - 142 243 IPR038408 -
Trre10g02107 649 SUPERFAMILY Protein kinase-like (PK-like) 307 624 IPR011009 -
Trre10g02107 649 FunFam Putative DUF26-domain receptor-like protein kinase family protein 291 398 - -
Trre10g02107 649 ProSiteProfiles Gnk2-homologous domain profile. 32 133 IPR002902 -
Trre10g02107 649 Pfam Salt stress response/antifungal 146 240 IPR002902 -
Trre10g02107 649 Pfam Salt stress response/antifungal 49 130 IPR002902 -
Trre10g02107 649 CDD STKc_IRAK 329 600 - -
Trre10g02107 649 Gene3D Phosphorylase Kinase; domain 1 283 398 - -
Trre10g02107 649 Pfam Protein tyrosine and serine/threonine kinase 326 523 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02107 Trre-Chr10 21313825 21316914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02107 1 649 Receptor kinase-like Gene Family AT1G70520 66.769 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre10g02107 PK_Tyr_Ser-Thr 9.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02107 - - gmx:100305420 1070.84