Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02077 ATGAAAATGGTAAGGATCATACTTGTGACCGTTTTGTTTTTCAACTTGGTCATTGTTCCTTCAATAGCTTTTCCATTTGGAAATGGATATGGTTTTGATAAACCAAAAGAAGGTAATAATAACTATGATGATAAACCAAAAGAAGATAATAATAATAATAATAATAATAATAATAACTATGATGATAAACCAAAAGAAGATAATAATAATAATAATAATAATAACTATGATGATAAACCAAAGGAAAAACCAAATAATGATGTTAATGATAATAACAATGTTGGTAATCTTAAGCAAGGATTCTATAGCGGTAGTTGCCCCAATGCGGAGAAAATTGTGGCGGATACTCTTGCAGAGATCGTTAAAATGAATCCAAATGCAGTTGCTAACCTCCTTCGTCTTCAATTTCATGACTGCTTCGTTGTTGGATGTGATGCATCAATCTTGCTAGACTACTCACCAACAGGAGAACAAGTAGAAAAAAGTTCATTTTTCAATGGTCAACTTCTCAAAGGAGCTGATATAGTTGATGATATAAAATCAAAGCTAGAAGAACAATGTCCAGGAGTAGTATCATGCTCGGACACATTAGCATTCGCAATCAATGAAGGAATGGTCCTTGCAGGTTTACCTCGTAGAGCACCTCTTGGCGGTCGTAGAGATTCCGTCTATTCCCTCGCATCTGTCGTGGAAGATAACAACCTTCCAATGCCTGGTTGGTCGATCGAAAGAATGATTGAGCTCTTTACGAGAAAAGGGTTCACAATTGAAGAAATGGTTATTTTAATTGGTGCACATTCAATTGGTTCAGTTCATTGTGATATTTTTATGGAAAGGATTTACAATTTCGCAAATACAAGAAAACCTGACCCTACACTACCGGCTCCAGTAATTAATGAGTTTCAACAAATATGTAAGAATGCTGGGACACCTCAATTTAGAAACCCACCAGTGAATTTCGATGAGACACCGACGGTGCTTGATACCTTGTTTTTCAAGAATATGGTGAATAGAAACAAGACAACTATACTTACAGATTCTCATTTGATCAATGATCCTAGAACAATTCCTATTGTTCAACAGATGGCCAATGAGGATGGTTTGTGGCAACAAAGGTTTCCTGAGGTTATGGATAAAATGAGTTCTTTGAATGTTCTTACCGGAAATAATGGTGAAGTGAGGAAGACTTGTAGGTCCACTAATTAA 1206 0.3566 MKMVRIILVTVLFFNLVIVPSIAFPFGNGYGFDKPKEGNNNYDDKPKEDNNNNNNNNNNYDDKPKEDNNNNNNNNYDDKPKEKPNNDVNDNNNVGNLKQGFYSGSCPNAEKIVADTLAEIVKMNPNAVANLLRLQFHDCFVVGCDASILLDYSPTGEQVEKSSFFNGQLLKGADIVDDIKSKLEEQCPGVVSCSDTLAFAINEGMVLAGLPRRAPLGGRRDSVYSLASVVEDNNLPMPGWSIERMIELFTRKGFTIEEMVILIGAHSIGSVHCDIFMERIYNFANTRKPDPTLPAPVINEFQQICKNAGTPQFRNPPVNFDETPTVLDTLFFKNMVNRNKTTILTDSHLINDPRTIPIVQQMANEDGLWQQRFPEVMDKMSSLNVLTGNNGEVRKTCRSTN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02077 401 ProSitePatterns Peroxidases proximal heme-ligand signature. 258 268 IPR019793 -
Trre10g02077 401 Gene3D - 101 401 - -
Trre10g02077 401 SUPERFAMILY Heme-dependent peroxidases 97 401 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 FunFam Peroxidase 100 239 - -
Trre10g02077 401 Pfam Peroxidase 114 364 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 PRINTS Haem peroxidase superfamily signature 191 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 PRINTS Haem peroxidase superfamily signature 320 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 PRINTS Haem peroxidase superfamily signature 258 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 PRINTS Haem peroxidase superfamily signature 128 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 PRINTS Haem peroxidase superfamily signature 209 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 FunFam Peroxidase 236 380 - -
Trre10g02077 401 PRINTS Plant peroxidase signature 106 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 PRINTS Plant peroxidase signature 375 388 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 PRINTS Plant peroxidase signature 190 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 PRINTS Plant peroxidase signature 335 352 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 PRINTS Plant peroxidase signature 130 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 PRINTS Plant peroxidase signature 209 224 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 PRINTS Plant peroxidase signature 171 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 PRINTS Plant peroxidase signature 257 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 CDD secretory_peroxidase 97 400 IPR033905 GO:0004601|GO:0042744
Trre10g02077 401 MobiDBLite consensus disorder prediction 35 94 - -
Trre10g02077 401 Gene3D Peroxidase, domain 2 236 380 - -
Trre10g02077 401 ProSiteProfiles Plant heme peroxidase family profile. 96 401 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 PANTHER PEROXIDASE 25-RELATED 99 389 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g02077 401 ProSitePatterns Peroxidases active site signature. 128 139 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02077 Trre-Chr10 20910446 20911883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02077 95 401 Peroxidase AT5G17820 37.013 2.20e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02077 K00430 - gmx:100802856 426.402