Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre10g02036 | ATGGAAGAAGCACTTCACCGTCTCAACGGAACTTCCCCAACAATCATACCTGACATACTCGAAACAAAAAAACCAACAACAAAAAGAACATCACGCGAAAACACAACAACAACAACAAGCACCGGAAACGGCGGCGCACTTCGTTACCGTGGAGTACGCCGTCGACCATGGGGTCGTTACGCAGCTGAAATAAGAGACCCACAGTCAAAAGAACGCCGTTGGCTTGGTACTTTCGATACAGCTGAAGAAGCTGCTTGTGCTTATGACTGCGCCGCACGTGCCATGCGTGGTATCAAAGCTCGCACCAATTTCGTTTACCCAACTTCTCCATCACCACACTCCACCACCACTTTCCCTTCTTTCAACTTCCCTAAACATTCTCAAACTAACCGCCACGTGTCTACTTCTGGTTGGTCTGAACAACAACAACAACCTCCTGCTGCTATTGATTTCTCTCATAACAGAAACCCTTCATCTTCTTCTTCTTCTTCACTTGACATGCTTCTATTTCGTGATTTCACCAACTCTTCAAATCATCACTCCCACGATAATTTTCCTTATTCTCACAACAACAACAACGGTCGTTCTAGCTCTGCGTTTTTACCAGGTTGTTGTTTGGTGAATTCTTGTGGAGGGGGTGCAAATAGTAACATGAACAACAATGCTTTTGGAGCTGTAGATGTGAATAATGGGAACATAGTTACTTCTGCTGATGAAGATTCGGATTTTTTCCCTAAAGAATCTTCTGATTCTGGTTTACTGGAAGAGATTGTGAGTAAATTTTTACCTAAACCTAAGCAAGAGATTAAAACTGGGATTTTGCCAAAGACAGGATCTTTATCTGACCCTTTTGTTTCTACTGCACCTGTGTATGATCACATGCTTGAGATGAAAAAAGGGATTACAAAGAATGAATTTTTAGGTGTTGGGTATGCTCAAAATGGTTTTAATATGCAGCAGTATGAAAATTTCAATAATGGGTTTAGTAATTTTCAGTCTGTTCCTGTTGGGAATGAACAAATTATGGTGAATCATGCTGAGAATTATGTCATTCAGTATCAAGAGTTTCTTGATGCTTTTGCACTCAGGATGCAAAATGCTTAG | 1104 | 0.4121 | MEEALHRLNGTSPTIIPDILETKKPTTKRTSRENTTTTTSTGNGGALRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGIKARTNFVYPTSPSPHSTTTFPSFNFPKHSQTNRHVSTSGWSEQQQQPPAAIDFSHNRNPSSSSSSSLDMLLFRDFTNSSNHHSHDNFPYSHNNNNGRSSSAFLPGCCLVNSCGGGANSNMNNNAFGAVDVNNGNIVTSADEDSDFFPKESSDSGLLEEIVSKFLPKPKQEIKTGILPKTGSLSDPFVSTAPVYDHMLEMKKGITKNEFLGVGYAQNGFNMQQYENFNNGFSNFQSVPVGNEQIMVNHAENYVIQYQEFLDAFALRMQNA | 367 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre10g02036 | 367 | ProSiteProfiles | AP2/ERF domain profile. | 48 | 105 | IPR001471 | GO:0003700|GO:0006355 | |
Trre10g02036 | 367 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 33 | 194 | - | - | |
Trre10g02036 | 367 | SUPERFAMILY | DNA-binding domain | 48 | 105 | IPR016177 | GO:0003677 | |
Trre10g02036 | 367 | MobiDBLite | consensus disorder prediction | 31 | 45 | - | - | |
Trre10g02036 | 367 | PRINTS | Ethylene responsive element binding protein signature | 49 | 60 | IPR001471 | GO:0003700|GO:0006355 | |
Trre10g02036 | 367 | PRINTS | Ethylene responsive element binding protein signature | 71 | 87 | IPR001471 | GO:0003700|GO:0006355 | |
Trre10g02036 | 367 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Trre10g02036 | 367 | SMART | rav1_2 | 48 | 111 | IPR001471 | GO:0003700|GO:0006355 | |
Trre10g02036 | 367 | MobiDBLite | consensus disorder prediction | 107 | 163 | - | - | |
Trre10g02036 | 367 | Gene3D | AP2/ERF domain | 48 | 106 | IPR036955 | GO:0003700|GO:0006355 | |
Trre10g02036 | 367 | Pfam | AP2 domain | 48 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Trre10g02036 | 367 | CDD | AP2 | 48 | 104 | IPR001471 | GO:0003700|GO:0006355 | |
Trre10g02036 | 367 | FunFam | Ethylene-responsive transcription factor 2 | 48 | 106 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre10g02036 | Trre-Chr10 | 19937191 | 19938294 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre10g02036 | 1 | 332 | AP2-EREBP Transcription Factor Family | AT1G24590 | 34.688 | 2.11e-44 | 153 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Trre10g02036 | AP2 | 2.9e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre10g02036 | - | - | psat:127121366 | 427.557 |