Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02010 ATGTTGACATCAATGCAAAGTTGTGTTGGCTCTTCACCTCTACTATTGCCAGTTAGTATAAATCAGCCTCAAGGGTGCGTTAAGTATTCCAGACCGAACATTGTTAGGATGCAACGCTTACCATATAACATCAGAAAGGGAGAACTTCAAACTGCAACTTCTCGAAGTTCCTCGTCTCGATTCAGATGTGCTGCTGCTTTGAATGCTACATGCGCTGCTGCTGGTGCAACCCAGACTGTAACCCGCAACGCTCGGACAATTACGGTTACTCCTGACAAAGTGAGGAACCCTAGACTTGATGACAATGGGCCTGGATTGCCACCTCGCGATGATGATGGCAACGGTGGTAATGGAGGAGGAGGCGGCGGTAATTTTTCAGGTGGACTAGTCCTTTTGGGTATTCTTGGTATCCTTGACATCCTTAAAGACTTAGAGGGTGAATTGCAAAGCAAAGTCAAAGAATGGAAATTTCATCAAGCTTGA 483 0.4576 MLTSMQSCVGSSPLLLPVSINQPQGCVKYSRPNIVRMQRLPYNIRKGELQTATSRSSSSRFRCAAALNATCAAAGATQTVTRNARTITVTPDKVRNPRLDDNGPGLPPRDDDGNGGNGGGGGGNFSGGLVLLGILGILDILKDLEGELQSKVKEWKFHQA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02010 160 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 2 151 IPR040299 -
Trre10g02010 160 MobiDBLite consensus disorder prediction 87 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02010 Trre-Chr10 19660050 19663499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02010 63 147 C2H2 Transcription Factor Family AT1G56200 57.471 1.38e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02010 - K20726 gmx:100781669 101.679