Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g02002 ATGAATCCTATTTGGATTCATTCTAGATCTACTGGTAAGCCATATTATGGAATTCTTCATCGGATTGATGTTGGTGTTGTTATTGATTTGGAGCCTGCTAGATATGAGGATCCTACGCTTTCAATTGCTGGTGTTGTTCAGTCTCAGAAGCTTGTCGTAAGAGTGATTTCGCAGCTTCATTCGCTTCATGGTGGTGATGTTAAGGTTTTGTGTGATACTTTTGTTAAGAGTGTTAGAGAATTGACTAGTTATGATAAGCTTAAACCGCCAATAACTTATTGGGGCTAA 288 0.3819 MNPIWIHSRSTGKPYYGILHRIDVGVVIDLEPARYEDPTLSIAGVVQSQKLVVRVISQLHSLHGGDVKVLCDTFVKSVRELTSYDKLKPPITYWG 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g02002 95 Gene3D PAS domain 1 62 - -
Trre10g02002 95 Pfam PAS fold 1 33 IPR013654 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g02002 Trre-Chr10 19493465 19493752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g02002 1 87 Histidine Kinase Gene Family AT2G18790 74.713 1.02e-43 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g02002 K12121 - gmx:100799831 146.747